Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq664 205 1e-47 >seq664 Length=41649 Score = 205 bits (226), Expect = 1e-47 Identities = 910/1428 (64%), Gaps = 31/1428 (2%) Strand=Plus/Minus Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728 |||||||| || ||||| | | |||||||| ||| ||||||| ||| ||||| Sbjct 34576 TTGACAATTTGGAATTCACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGT 34517 Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788 || || ||||| || | |||||||||||| | || || |||||||||||||| |||| Sbjct 34516 TCGAAACATTCGTTGTAACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAAT 34457 Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAG 110848 || | ||| | | || | ||| || ||| | | | ||||| || | Sbjct 34456 AACAATGAGTTTCTCAATCCAGTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCAC 34397 Query 110849 T--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906 | || |||| | | |||||||||||||| || | || ||||| || || || | Sbjct 34396 AAATCAG-TTGGAG-CTCTATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTG 34339 Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966 |||| | || | || || | ||||| | | |||| ||| | |||| | Sbjct 34338 AACCTTGGAAAGATTGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATG 34279 Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026 || || |||| ||||| || || || ||||| | ||||||| || ||||||| Sbjct 34278 CAGCATGGTACAATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAA 34219 Query 111027 ATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085 ||| | | || || ||||| ||| || | |||||||||||| | |||||||| Sbjct 34218 ATG-GAATTCTCAAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGT 34160 Query 111086 CTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACT 111145 ||||||| |||||| || |||| ||||| || || || ||| ||||||||||||||||| Sbjct 34159 CTGTGTCTCATATTTGAGTTTCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACT 34100 Query 111146 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGT- 111204 | ||| | |||| | |||| | |||| | || || | ||||| ||||| |||| Sbjct 34099 CTGTTCAAATTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTT 34040 Query 111205 -----GCGAGTCTCTT------CATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 || |||| |||||| | || | || || || |||||||| Sbjct 34039 TGTTGTTGACCATCTTCTGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTA 33980 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 |||||||| || || || ||||||| || || | |||||| ||| || || || Sbjct 33979 CAAACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCACAACACAAATTAGATGAT 33920 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || || || ||||| ||||| ||| || ||||| || ||||| ||||| | || Sbjct 33919 TTGATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATA 33860 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGT 111433 | || || || || || || |||| || | ||||| | ||| | || | || | Sbjct 33859 AATGGTGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATA-ATTTTTG--TGCT 33803 Query 111434 ACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 111490 ||| | | | | | ||| || | | || | |||| | |||||| || Sbjct 33802 TTAATAGTTTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCT 33743 Query 111491 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 111550 |||| | || | |||||| || | |||| | || | | ||| | | Sbjct 33742 GCACCATAAACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAA 33683 Query 111551 CCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA 111610 ||| | ||| | ||| || | ||||||| ||| | | | ||| | |||||| Sbjct 33682 TTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTT 33623 Query 111611 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 111670 | | ||||| | ||| || || || | |||| || || | ||||| Sbjct 33622 GCTCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTA 33563 Query 111671 TGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTAC 111726 |||||||| || | ||| | || | || || |||| | ||| |||||| || Sbjct 33562 TGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTT-TATTACCACCTTGATCAAC 33504 Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786 ||| | || || || || || | || ||||||||| | |||| || ||||| Sbjct 33503 ATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATT 33444 Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846 || || |||| ||| | | ||| | || ||| || || | |||||||| || Sbjct 33443 AGTACCTGCAATATAAGAACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACC 33384 Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906 ||| || || || ||||| || | | ||| |||| ||||| | || || || Sbjct 33383 AGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATC 33324 Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 || || | || | |||||| || ||||| || ||||||||||| ||||||||||| Sbjct 33323 GTCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAA 33264 Query 111967 GAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGA 112025 | ||||| | ||| || |||| ||| || |||||| | || || ||||||| Sbjct 33263 TAAAGTTGGAGATGCATGTGTGAA-ATATCTCAAAGACATCAAATTATAAGTTTCCAAGA 33205 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | ||||| ||| || || || |||| || || | ||||| || Sbjct 33204 CTTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCATGATCA 33157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026182853600