Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq664 230 3e-55 >seq664 Length=41649 Score = 230 bits (254), Expect = 3e-55 Identities = 900/1404 (64%), Gaps = 37/1404 (3%) Strand=Plus/Plus Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291 || ||||| | || || |||| |||||||| ||| ||||| |||||||| || | Sbjct 33157 TGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAAAAAGTCTTGGAAACTT 33216 Query 104292 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 | | |||||| || ||| |||| || ||| | ||||| | ||||||||||| Sbjct 33217 ATAATTTGATGTCTTTGAGATAT-TTCACACATGCATCTCCAACTTTATTCAATGCTGGA 33275 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 ||||||||||| |||||||| || |||||| | || | || || || || || | Sbjct 33276 ACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAAAGACGATTCCATTGAT 33335 Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470 ||||| |||| ||| | | || ||||| || || || ||||| |||||||| Sbjct 33336 GGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAACTGCTGGTGGTATTGGT 33395 Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 104530 | || || ||| || | ||| | | ||| |||| || || ||||| || Sbjct 33396 CTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGGTACTAATGGGACTTCT 33455 Query 104531 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCT 104590 |||| | ||||||||| || | || || || || || | ||||| |||||| | Sbjct 33456 AATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAGATATGTTGATCAAGGT 33515 Query 104591 GGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCAT 104646 || | |||| || || | || | ||| | || |||||||| ||||| | Sbjct 33516 GGTAATA-AAAGACCTGGTGCTTTTGCTCTTTATTTAGAACCATGGCATAGTGATATTTT 33574 Query 104647 GGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTT 104706 || || |||| | || || || ||| | || || | | ||| | || Sbjct 33575 TGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATTAGAGCAAGAGATTTGTT 33634 Query 104707 CTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTC 104766 | || | ||| |||||||| | || ||| | | |||| | || | | ||||| | Sbjct 33635 TCCTGCATTATGGGTTCCAGATTTATTTATGCAAAAAGTTAAAGAAAATTCAGATTGGAC 33694 Query 104767 TCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGC 104826 | |||| |||| | || || ||| | |||| |||| || |||||| Sbjct 33695 ATTGTTTTCTCCAAGTGAAGCTCCAGGTTTAAGTGATGTTTATGGTGCAGATTTTGAAAA 33754 Query 104827 CCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGT 104886 | |||| | || | |||||| | | | || | ||| | | Sbjct 33755 ATTGTACAATAGATATGTTTCAGAAGGAAGAGGTAGAAAAACTATTAAAGCACAAAAATT 33814 Query 104887 GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGA 104946 ||| | ||||| | | | ||||| || || |||||||||| || |||||||||| Sbjct 33815 ATGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATTTATTGTTTACAAAGA 33874 Query 104947 CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTG 105006 || |||||| |||| ||||||||| ||||| || ||||| || ||| | || Sbjct 33875 TGCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAAATCATCTAATTTGTG 33934 Query 105007 TACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 105066 | ||||| |||||| | |||| || || || || ||||| ||||| | || || || Sbjct 33935 TTGTGAAATTGTGGAATATTCAGATAACGACGAAACTGCTGTTTGTAATTTGGCTTCTAT 33994 Query 105067 CGCTCTCCCCAAGT------ATGTGGATCCAGAG--------ACAA-AGACATTTGATTA 105111 ||| | ||| | |||| | |||| |||| | || | ||||| Sbjct 33995 TGCTTTGCCCGCTTTCATCAATGT---TTCAGAAGATGGTCAACAACAAACTTATGATTT 34051 Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171 ||||| | ||||| ||| | ||| | || | ||| | |||||||| ||||| || Sbjct 34052 CCAAAAATTACACGATGTTGCAAAAGTCATTACAAGAAATTTGAACAGAGTCATTGACAG 34111 Query 105172 AAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 ||||| |||||| || || ||||| | || || |||||||||||| | || |||| || Sbjct 34112 AAATTATTACCCTGTGGAAACTGCAAGAAACTCAAATATGAGACACAGACCTATTGCCCT 34171 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291 |||||||| ||| | || ||| || || |||| | ||||||||||||| | Sbjct 34172 TGGTGTTCAAGGTTTGGCTGATACTTTTATGCTTTTGAGAATTCCATTTGATTCCGAACA 34231 Query 105292 AGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAG 105351 ||| || || | ||| | || || || || |||| || || || | || | Sbjct 34232 AGCCAAACAACTGAATATTCAAATTTTCGAAACATTGTACCATGCTGCATTGGAATC--- 34288 Query 105352 TTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408 |||| || |||| | || || |||||||| || | || | ||||| |||||||| Sbjct 34289 TTCAAACGAAATGGCCGTGGAAGAAGGTCCATACCAATCTTTCCAAGGTTCACCAGCTTC 34348 Query 105409 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGG 105466 |||||| || | |||||||| |||||||| ||| | | || | | || ||| Sbjct 34349 ACAAGGTGTTTTGCAATTTGACATGTGGGA--TAGAGCTCCAACTGATTTGTGGGAATGG 34406 Query 105467 GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCA 105526 ||| || | | ||| || ||| | || | | ||| | | |||||||| Sbjct 34407 GAATCTTTGAGAGAAAAAATTGTGGAAACTGGATTGAGAAACTCATTGTTATTGGCTCCA 34466 Query 105527 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 105586 ||||||||||| || || | |||||||||||| | || ||||| || ||||| | ||| Sbjct 34467 ATGCCAACAGCATCAACATCGCAAATCTTGGGTTACAACGAATGTTTCGAACCATTCACT 34526 Query 105587 ACGAACATCTA-TCTGAGAAGAAC 105609 | ||||| || ||| |||||||| Sbjct 34527 TCAAACATGTACTCT-AGAAGAAC 34549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255397546840