Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq506 114 8e-21
seq596 102 5e-17
>seq506
Length=5049
Score = 114 bits (126), Expect = 8e-21
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || || ||| || ||||||||||| || || ||
Sbjct 1900 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1841
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||||||||| ||||| || || | |||||||| || ||
Sbjct 1840 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1781
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || |||||| ||| ||| | |||||| | ||| ||||| | || ||
Sbjct 1780 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1722
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| ||| || |||||||| || || ||||| || ||||| ||||| |||
Sbjct 1721 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTG 1670
>seq596
Length=25494
Score = 102 bits (112), Expect = 5e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| || ||||||||||| || || ||
Sbjct 11924 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 11983
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||||||||| ||||| || || | |||||||| || ||
Sbjct 11984 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 12043
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || || |||||| ||| ||| | ||| ||| || || ||||| | || ||
Sbjct 12044 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 12102
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698
||| | || || || ||||| ||||| ||||| ||||||
Sbjct 12103 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAAA 12142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726757696653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |