Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq506 114 8e-21 seq596 102 5e-17 >seq506 Length=5049 Score = 114 bits (126), Expect = 8e-21 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || || ||| || ||||||||||| || || || Sbjct 1900 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1841 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| || || | |||||||| || || Sbjct 1840 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1781 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||| ||| | |||||| | ||| ||||| | || || Sbjct 1780 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1722 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| ||| || |||||||| || || ||||| || ||||| ||||| ||| Sbjct 1721 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTG 1670 >seq596 Length=25494 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || |||||| || ||||||||||| || || || Sbjct 11924 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 11983 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| || || | |||||||| || || Sbjct 11984 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 12043 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||| ||| | ||| ||| || || ||||| | || || Sbjct 12044 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 12102 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698 ||| | || || || ||||| ||||| ||||| |||||| Sbjct 12103 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAAA 12142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726757696653