Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq631 140 3e-28 seq506 140 3e-28 seq596 136 3e-27 >seq631 Length=151218 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| |||| || || | || || | ||||| ||| | || Sbjct 131177 ATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCCTCA 131236 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||||||||| || ||||| || ||| Sbjct 131237 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131296 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || | || || | || || ||||| ||||||||| | || |||| ||||| ||||| Sbjct 131297 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGAC-GGCAGAACGTTGTCCGACTACAA 131355 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||||||| | || ||||||||| | ||| | ||||| || Sbjct 131356 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGGGAT 131406 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| |||| || || | || ||| | ||||| ||| | || Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||||||||| || ||||| || ||| Sbjct 131465 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131524 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || ||||| ||||||||| | || | ||||| |||||| Sbjct 131525 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAAC 131584 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||||||| | || ||||||||| | ||| | ||||| Sbjct 131585 ATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631 >seq506 Length=5049 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || || | ||||| | ||||| ||| | || Sbjct 1674 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCT 1733 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 1734 GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAA 1793 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | || || |||||| Sbjct 1794 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1853 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| || || ||| | || ||||||||| | ||| | ||||| Sbjct 1854 ATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1900 >seq596 Length=25494 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| ||||| | || || ||| |||| ||||| ||||| ||| | |||||| | || Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | |||||| ||||| |||||||||||||| || ||||| || ||||| | || Sbjct 12081 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 12022 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || |||||||||||||| || || | || || |||||||||||||| Sbjct 12021 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 11962 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || | || ||||| ||| | ||| | ||||| Sbjct 11961 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434914371568320