Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq631 113 3e-20
seq506 98.7 7e-16
seq596 89.7 4e-13
>seq631
Length=151218
Score = 113 bits (124), Expect = 3e-20
Identities = 172/242 (71%), Gaps = 5/242 (2%)
Strand=Plus/Plus
Query 27777 ACACAATAGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGA 27836
|||||||| ||||||||||||||||| |||||| | ||||||||| || || | ||
Sbjct 131165 ACACAATAA-AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGA 131223
Query 27837 TGTCGAAAGCACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGT 27894
|| ||| | | ||| || |||| ||||| || || |||||||||||
Sbjct 131224 AGTTGAATCCTCAGACACCATCGACAAC--GTCAAGTCCAAGATCCAGGACAAAGAAGGG 131281
Query 27895 GTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGC 27954
|||| || || ||| | || |||||||| || ||||| ||||| |||| | |
Sbjct 131282 ATTCCACCTGACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACG 131341
Query 27955 TTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGC 28014
|||||||| |||||||||||||| ||| || | || ||||||||| | ||| | ||
Sbjct 131342 TTGTCCGACTACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGT 131401
Query 28015 GG 28016
||
Sbjct 131402 GG 131403
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| |||||||| ||| | ||||||||| || || | || || ||| | |
Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || |||| ||||| || || ||||||||||| |||| || |
Sbjct 131465 GACACCATCGACAAC--GTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACC 131522
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || |||||||| || ||||| ||||| |||| | | |||||||| ||||
Sbjct 131523 AACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACA 131582
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||||||| | ||| | || ||
Sbjct 131583 ACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631
>seq506
Length=5049
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || |||||| | || || ||| ||||| | || |||||| |
Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| || ||||| || ||| ||||| |||||||||||| | || |
Sbjct 1731 TCTGACACCATTGACAAT--GTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTG 1788
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || ||||||||||| || | | | ||||| || |
Sbjct 1789 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 1848
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||| |||||||| ||| | || ||||||||| | ||| | || ||
Sbjct 1849 ACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1900
>seq596
Length=25494
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/224 (69%), Gaps = 10/224 (4%)
Strand=Plus/Minus
Query 27798 TTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGACGATGT 27857
|||||| ||||| | ||||| || ||| || | || |||||| | |||||
Sbjct 12142 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGAC----- 12088
Query 27858 ACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAA 27912
|| |||| |||||| ||||| |||||||||||| |||| || || |||
Sbjct 12087 ACCATCGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAA 12028
Query 27913 CGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATC 27972
| || || ||||| || ||||||||||| || | | | ||||| || ||||||||
Sbjct 12027 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATT 11968
Query 27973 CAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||| |||| | || ||||| ||| | ||| | || ||
Sbjct 11967 CAAAAAGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355859186228907
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |