Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq596 149 1e-30
seq631 143 6e-29
seq506 116 9e-21
>seq596
Length=25494
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||||||||| |||||||| ||||| || || | | || || ||
Sbjct 11935 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 11994
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || ||||| | | |||||||||||| |||| ||||| ||
Sbjct 11995 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 12054
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || ||| ||||| ||||||||||| ||| ||| || || ||||||||
Sbjct 12055 GTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 12114
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | || || |||||
Sbjct 12115 AGTCTTACCAGTTAAGGTTTTGACAAA 12141
>seq631
Length=151218
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| ||||||||||| || || | | || || || ||||||| |||
Sbjct 131608 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCGTCTTCCAACTG 131549
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || || || | | |||||||||||| |||| ||||| ||||||||||||||
Sbjct 131548 TTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTT 131489
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||||||||| ||| |||||| || | |||||| || || || ||
Sbjct 131488 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGT 131429
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| ||||| | |||||
Sbjct 131428 CAAAGTCTTCACAAAGATTTGCAT 131405
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| ||||||||||| || || | | || || || ||||||| |||
Sbjct 131380 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTG 131321
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || || || | | |||||||||||| |||| ||||| ||||||||||||||
Sbjct 131320 TTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTT 131261
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||||||||| ||| |||||| || | ||||| || || || ||
Sbjct 131260 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGTTTTCCCAGT 131201
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
| ||| || ||||| | ||||||||
Sbjct 131200 CAAAGTTTTAACAAAAATTTGCATTTT 131174
>seq506
Length=5049
Score = 116 bits (128), Expect = 9e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| ||||| |||||||| ||||| || || | | || || |||||||||| ||
Sbjct 1877 GTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTG 1818
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || ||||| | | |||||||||||| || | ||||| ||||| ||||| ||
Sbjct 1817 TTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTT 1758
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || || || |||||||||||| ||| || || | || || || || || ||
Sbjct 1757 GGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGT 1698
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
| ||| || || || | ||||| ||
Sbjct 1697 CAAAGTTTTAACGAAAATTTGCATCTT 1671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159140994938465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |