Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq596 149 1e-30 seq631 143 6e-29 seq506 116 9e-21 >seq596 Length=25494 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||||||||| |||||||| ||||| || || | | || || || Sbjct 11935 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 11994 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | |||||||||||| |||| ||||| || Sbjct 11995 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 12054 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || ||| ||||| ||||||||||| ||| ||| || || |||||||| Sbjct 12055 GTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 12114 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | || || ||||| Sbjct 12115 AGTCTTACCAGTTAAGGTTTTGACAAA 12141 >seq631 Length=151218 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| ||||||||||| || || | | || || || ||||||| ||| Sbjct 131608 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCGTCTTCCAACTG 131549 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || || || | | |||||||||||| |||| ||||| |||||||||||||| Sbjct 131548 TTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTT 131489 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||||||||| ||| |||||| || | |||||| || || || || Sbjct 131488 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGT 131429 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| ||||| | ||||| Sbjct 131428 CAAAGTCTTCACAAAGATTTGCAT 131405 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| ||||||||||| || || | | || || || ||||||| ||| Sbjct 131380 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTG 131321 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || || || | | |||||||||||| |||| ||||| |||||||||||||| Sbjct 131320 TTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTT 131261 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||||||||| ||| |||||| || | ||||| || || || || Sbjct 131260 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGTTTTCCCAGT 131201 Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117 | ||| || ||||| | |||||||| Sbjct 131200 CAAAGTTTTAACAAAAATTTGCATTTT 131174 >seq506 Length=5049 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||||| |||||||| ||||| || || | | || || |||||||||| || Sbjct 1877 GTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTG 1818 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || ||||| | | |||||||||||| || | ||||| ||||| ||||| || Sbjct 1817 TTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTT 1758 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || || |||||||||||| ||| || || | || || || || || || Sbjct 1757 GGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGT 1698 Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117 | ||| || || || | ||||| || Sbjct 1697 CAAAGTTTTAACGAAAATTTGCATCTT 1671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159140994938465