Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq596 168 2e-36
seq631 165 2e-35
seq506 165 2e-35
seq392 86.0 1e-11
>seq596
Length=25494
Score = 168 bits (186), Expect = 2e-36
Identities = 160/202 (79%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||||||||||||||| | ||||| || | ||||||||| ||
Sbjct 11935 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 11994
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| ||
Sbjct 11995 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 12054
Query 225618 GTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| ||| || || || ||||||||||| |||| ||| || |||| ||||
Sbjct 12055 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGA 12113
Query 225677 TCGTCTTGCCCGTCAAAGTTTT 225698
| ||||| || || || |||||
Sbjct 12114 TAGTCTTACCAGTTAAGGTTTT 12135
>seq631
Length=151218
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | |||||| || || || ||||||| ||||| |||| ||| ||||| ||
Sbjct 131392 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCC 131333
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||| || ||||| || || | || ||||||||| || ||||| ||||| ||
Sbjct 131332 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 131273
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| || |||||||||||||||| ||| || || || |||||
Sbjct 131272 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGAT 131213
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || ||||||||||| | || | |||||||||
Sbjct 131212 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT 131174
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | |||||| || || || ||||||| ||||| |||| ||| ||||| ||
Sbjct 131620 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCC 131561
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||| || ||||| || || | || ||||||||| || ||||| ||||| ||
Sbjct 131560 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 131501
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| || |||||||||||||||| ||| || || || |||||
Sbjct 131500 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 131441
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || |||||||| || | || | ||||||
Sbjct 131440 GGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405
>seq506
Length=5049
Score = 165 bits (182), Expect = 2e-35
Identities = 170/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| || |||||||||||||| | ||||| || | ||||||||| ||
Sbjct 1889 TCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1830
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || ||||||||| || || |||||||| ||
Sbjct 1829 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 1770
Query 225618 GTCTTGGATCTTTTGCTTCA-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| ||| |||| | || || |||||||| |||| ||| || || || || |
Sbjct 1769 GTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1711
Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || ||||||||||| | ||| | |||||| ||
Sbjct 1710 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 1671
>seq392
Length=8970
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/104 (79%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||||||||| |||||||||||||||||||| | | ||||| || || ||||
Sbjct 2755 TTCTGGATGACCAAAGAATCAGAATAAATGTTGATATAATACTGGATCACCACCACCTGC 2814
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774
| ||||| || ||||||||| |||||||| |||| ||||
Sbjct 2815 TACTTCAAAGAATGAAGTATTAAAGTTTCTATCCATTAATAACA 2858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192519878034254
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |