Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq664 520 1e-142 seq627 349 5e-91 >seq664 Length=41649 Score = 520 bits (576), Expect = 1e-142 Identities = 1471/2239 (66%), Gaps = 49/2239 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 || ||||| |||| || || || | || || | | |||||||| || ||||| | | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || | ||| ||||||||||||||| || ||||| | || | || Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATGATG 34796 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 || ||||| | || ||| |||||| |||||||| ||| ||||| ||||| | || Sbjct 34795 TGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGATG 34736 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 || |||||||||| | |||||||| |||||| | | | ||| | || | |||| Sbjct 34735 ATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAATTCTTGAGGAATG 34676 Query 75617 TTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 |||| | ||||||||| ||| | | || || | || || |||| ||| Sbjct 34675 TTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCGTTC 34616 Query 75674 CACAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732 || ||| | || ||| |||| || | | ||||| |||||||| ||||| || Sbjct 34615 CA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCACC 34557 Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792 |||||| ||||| || ||| || || || ||||||| | | |||| |||| || Sbjct 34556 AGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACC 34497 Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852 ||| ||||| | ||||| || || ||||| || |||| || || ||||| | || Sbjct 34496 CAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCC 34437 Query 75853 ATGTGTTCTGA-TTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911 | || | | | |||| ||| | | | ||| ||| ||||| | ||| | ||| | || Sbjct 34436 A-GTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTAT 34378 Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAG 75971 |||| | || |||| | || || | ||| ||| || | | | || ||| | Sbjct 34377 CCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATG 34318 Query 75972 TCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGA 76031 || || | | || | |||| | || || ||| | | || | |||||||| Sbjct 34317 GACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGA 34258 Query 76032 AAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGT-AAAAGAATA 76090 |||| | |||| || | || |||| |||||| ||| | | | ||||| ||| Sbjct 34257 AAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGA-ATTCTCAAAAGCATA 34199 Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || | ||| || | || ||||| |||| |||||||||| |||||| |||| || || Sbjct 34198 AAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTT 34139 Query 76151 T---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207 ||| ||| | |||||||||||| | || || | | | || | |||||| | Sbjct 34138 CTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTA 34082 Query 76208 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-AATTTT--------CCATCTATC 76258 | ||||| | || || | || ||| | |||||| || ||| |||||| || Sbjct 34081 ATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCT-TC 34023 Query 76259 ACAAACAT--ATTAAG--------AGCTATAGATGCTAGATTACAAACGGC---TACCTC 76305 |||||| || || ||| ||||| || | ||||||||| || | | || Sbjct 34022 TGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTC 33963 Query 76306 ATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAG 76365 ||| | | ||||| | || || || | |||| | ||||||||||| | Sbjct 33962 GTTATCT---GAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAA 33906 Query 76366 ATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGT 76425 ||||| ||| || ||||||||||| | || || |||| || ||| || || || || Sbjct 33905 ATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGT 33846 Query 76426 TTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTA 76485 |||| | |||| ||| | |||| | ||| | | ||||| || | ||| || Sbjct 33845 TTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGCTTTAATAGTT--TTTCTA 33788 Query 76486 TCGCTTCTCTCTTT--CATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 | |||| ||| ||||| | || || |||||| || | || |||||||| Sbjct 33787 CCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACATCA 33728 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 ||||| ||| |||| | ||| | | ||||| ||| || || ||| ||||| | Sbjct 33727 CTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTT 33668 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 | |||||| | ||| || | ||||| ||| ||| | ||||| | |||| |||||| Sbjct 33667 TGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCT 33608 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || || ||| || || ||| | || || | ||||||| |||||||||||||| | Sbjct 33607 TTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAA 33548 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || | || | | |||| |||| ||||||||| || ||||| | |||||| ||||| ||| Sbjct 33547 TAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTA 33488 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || ||||||| | ||||||||| | || ||||| || ||||| || || | ||||||| Sbjct 33487 TTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAA 33428 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 || || | ||||||| |||| || || || || || || ||||||| || Sbjct 33427 GAACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATC 33368 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | |||||| ||| || || ||||| || || || || ||| || |||| || | Sbjct 33367 AAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACA 33308 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 || ||||| |||||||||| | ||||| ||||| || || || ||||||||| Sbjct 33307 AGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCA 33248 Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083 || ||||| || | ||| | | ||| || ||||| | ||| ||| ||||| | Sbjct 33247 TGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAA 33188 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143 |||||| || ||||| || | ||| | || ||| ||||||| ||| || | | | Sbjct 33187 CCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCA 33128 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 77203 || ||| | || || || ||| ||||||| ||||| ||||||||||| || ||| || Sbjct 33127 TTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAA 33068 Query 77204 TCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATG 77263 ||||| || |||| |||| | ||||| || |||| ||| ||||| | || Sbjct 33067 TCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAAT-TTGATA 33009 Query 77264 ACAGTGGT-AGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAA 77322 | || | | ||| ||||||||| || ||||||||| ||||||||| | |||| Sbjct 33008 AACGTCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAACATAAAAATATAA 32949 Query 77323 GTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTAT 77382 ||| || || | |||| ||||||| |||| || |||| ||| || | || || Sbjct 32948 ATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAGAAATAGCAAT 32889 Query 77383 TCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTG 77441 ||| ||||| | | ||||| |||||||| || || || | || | |||| | Sbjct 32888 TCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGT-CATATAAGCACATGTTTCAG 32830 Query 77442 CCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCA 77501 | || ||| |||| ||||| ||||||||||| || | ||| | || |||| | | Sbjct 32829 CAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAGATATAATTCTTT 32770 Query 77502 TGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATAC 77561 | || | |||||| | | | | | ||||||||||||||| | ||| | Sbjct 32769 GTGTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACATAATCTAGCAATTC 32710 Query 77562 GAGATGTGATTTTATCAAA 77580 ||| |||||||||||||| Sbjct 32709 TAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 349 bits (386), Expect = 5e-91 Identities = 625/905 (69%), Gaps = 16/905 (2%) Strand=Plus/Minus Query 46320 TTGTGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTT 46379 || || |||||| || |||||| || ||| || | ||| || || ||||| ||||| Sbjct 173553 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 173494 Query 46380 GCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAttttttt 46439 ||| | ||||| |||||||||||||||||||| ||||| | |||||||||| ||||| Sbjct 173493 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTC 173434 Query 46440 AAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTC 46499 | |||||| | | | |||||| ||||| ||||| | ||| ||||||| | | Sbjct 173433 ATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGC 173374 Query 46500 ACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559 | |||||| |||| | || || | || || || | | || |||||||| Sbjct 173373 AGCATTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGA 173314 Query 46560 GACAGCATCCGATATTATCGATGTTACTG---TTTCCTCACTTGGTGGATGCATCAAATG 46616 ||||| || | || || | || | | ||| | |||| || |||||| Sbjct 173313 AACAGCTTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATG 173257 Query 46617 TTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTT 46676 || ||| | || ||||||||||||| || || ||||||||||||| ||| ||||| || Sbjct 173256 TTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATT 173197 Query 46677 AGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGA 46736 ||||| || | || ||||| | || || || | |||||| || || || || || Sbjct 173196 TGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGA 173137 Query 46737 TCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGC 46796 || |||||||| | ||||| ||||| || ||||| || | ||| || | | || Sbjct 173136 ACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGC 173077 Query 46797 ATCATTAT---GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTT-ACACAAGGCATTG 46852 ||| | || ||||||| || |||||| ||||| ||||||||| | || || | Sbjct 173076 ATCTTCATCTTGAATCCATCTAATAGCCCATTCAGC-TTTTTCTTTGATTTGTGGAATAG 173018 Query 46853 TTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA 46912 |||| |||||||| || | || | |||| | |||||| | ||| ||||| || | Sbjct 173017 TTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA 172958 Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972 |||| ||| |||| ||| || ||||| || || || || |||||||||||| Sbjct 172957 AAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATT 172898 Query 46973 TTGCTTCAGTAATCTGTACCTCTGTACA-AAATCGTTCAGACAAATTCTCATTCACTATT 47031 | ||||| | |||||| || || | || |||| | || |||||||||||| || || Sbjct 172897 TAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCAC-CAAATTCTCATTGACAATC 172839 Query 47032 CCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTC 47091 ||||| |||||| |||||||| || || |||| ||| || |||||| | || Sbjct 172838 CCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTC 172779 Query 47092 AGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAAT 47148 | | ||||||||||| | ||||||||| || | ||| | |||||| || ||||| ||| Sbjct 172778 ATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAAT 172719 Query 47149 GACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACA 47208 || || || || ||| || | ||| || ||| | |||| ||| ||||| | |||| Sbjct 172718 GAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACA 172659 Query 47209 AATCT 47213 ||||| Sbjct 172658 AATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712927796445120