Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq664 520 1e-142
seq627 349 5e-91
>seq664
Length=41649
Score = 520 bits (576), Expect = 1e-142
Identities = 1471/2239 (66%), Gaps = 49/2239 (2%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|| ||||| |||| || || || | || || | | |||||||| || ||||| | |
Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|| | ||| ||||||||||||||| || ||||| | || | ||
Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATGATG 34796
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
|| ||||| | || ||| |||||| |||||||| ||| ||||| ||||| | ||
Sbjct 34795 TGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGATG 34736
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616
|| |||||||||| | |||||||| |||||| | | | ||| | || | ||||
Sbjct 34735 ATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAATTCTTGAGGAATG 34676
Query 75617 TTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|||| | ||||||||| ||| | | || || | || || |||| |||
Sbjct 34675 TTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCGTTC 34616
Query 75674 CACAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732
|| ||| | || ||| |||| || | | ||||| |||||||| ||||| ||
Sbjct 34615 CA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCACC 34557
Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792
|||||| ||||| || ||| || || || ||||||| | | |||| |||| ||
Sbjct 34556 AGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACC 34497
Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852
||| ||||| | ||||| || || ||||| || |||| || || ||||| | ||
Sbjct 34496 CAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCC 34437
Query 75853 ATGTGTTCTGA-TTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911
| || | | | |||| ||| | | | ||| ||| ||||| | ||| | ||| | ||
Sbjct 34436 A-GTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTAT 34378
Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAG 75971
|||| | || |||| | || || | ||| ||| || | | | || ||| |
Sbjct 34377 CCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATG 34318
Query 75972 TCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGA 76031
|| || | | || | |||| | || || ||| | | || | ||||||||
Sbjct 34317 GACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGA 34258
Query 76032 AAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGT-AAAAGAATA 76090
|||| | |||| || | || |||| |||||| ||| | | | ||||| |||
Sbjct 34257 AAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGA-ATTCTCAAAAGCATA 34199
Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150
|| | ||| || | || ||||| |||| |||||||||| |||||| |||| || ||
Sbjct 34198 AAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTT 34139
Query 76151 T---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207
||| ||| | |||||||||||| | || || | | | || | |||||| |
Sbjct 34138 CTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTA 34082
Query 76208 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-AATTTT--------CCATCTATC 76258
| ||||| | || || | || ||| | |||||| || ||| |||||| ||
Sbjct 34081 ATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCT-TC 34023
Query 76259 ACAAACAT--ATTAAG--------AGCTATAGATGCTAGATTACAAACGGC---TACCTC 76305
|||||| || || ||| ||||| || | ||||||||| || | | ||
Sbjct 34022 TGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTC 33963
Query 76306 ATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAG 76365
||| | | ||||| | || || || | |||| | ||||||||||| |
Sbjct 33962 GTTATCT---GAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAA 33906
Query 76366 ATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGT 76425
||||| ||| || ||||||||||| | || || |||| || ||| || || || ||
Sbjct 33905 ATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGT 33846
Query 76426 TTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTA 76485
|||| | |||| ||| | |||| | ||| | | ||||| || | ||| ||
Sbjct 33845 TTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGCTTTAATAGTT--TTTCTA 33788
Query 76486 TCGCTTCTCTCTTT--CATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543
| |||| ||| ||||| | || || |||||| || | || ||||||||
Sbjct 33787 CCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACATCA 33728
Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603
||||| ||| |||| | ||| | | ||||| ||| || || ||| ||||| |
Sbjct 33727 CTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTT 33668
Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663
| |||||| | ||| || | ||||| ||| ||| | ||||| | |||| ||||||
Sbjct 33667 TGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCT 33608
Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723
|| || ||| || || ||| | || || | ||||||| |||||||||||||| |
Sbjct 33607 TTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAA 33548
Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783
|| | || | | |||| |||| ||||||||| || ||||| | |||||| ||||| |||
Sbjct 33547 TAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTA 33488
Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843
|| ||||||| | ||||||||| | || ||||| || ||||| || || | |||||||
Sbjct 33487 TTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAA 33428
Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903
|| || | ||||||| |||| || || || || || || ||||||| ||
Sbjct 33427 GAACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATC 33368
Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963
| |||||| ||| || || ||||| || || || || ||| || |||| || |
Sbjct 33367 AAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACA 33308
Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023
|| ||||| |||||||||| | ||||| ||||| || || || |||||||||
Sbjct 33307 AGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCA 33248
Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083
|| ||||| || | ||| | | ||| || ||||| | ||| ||| ||||| |
Sbjct 33247 TGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAA 33188
Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143
|||||| || ||||| || | ||| | || ||| ||||||| ||| || | | |
Sbjct 33187 CCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCA 33128
Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 77203
|| ||| | || || || ||| ||||||| ||||| ||||||||||| || ||| ||
Sbjct 33127 TTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAA 33068
Query 77204 TCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATG 77263
||||| || |||| |||| | ||||| || |||| ||| ||||| | ||
Sbjct 33067 TCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAAT-TTGATA 33009
Query 77264 ACAGTGGT-AGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAA 77322
| || | | ||| ||||||||| || ||||||||| ||||||||| | ||||
Sbjct 33008 AACGTCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAACATAAAAATATAA 32949
Query 77323 GTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTAT 77382
||| || || | |||| ||||||| |||| || |||| ||| || | || ||
Sbjct 32948 ATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAGAAATAGCAAT 32889
Query 77383 TCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTG 77441
||| ||||| | | ||||| |||||||| || || || | || | |||| |
Sbjct 32888 TCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGT-CATATAAGCACATGTTTCAG 32830
Query 77442 CCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCA 77501
| || ||| |||| ||||| ||||||||||| || | ||| | || |||| | |
Sbjct 32829 CAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAGATATAATTCTTT 32770
Query 77502 TGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATAC 77561
| || | |||||| | | | | | ||||||||||||||| | ||| |
Sbjct 32769 GTGTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACATAATCTAGCAATTC 32710
Query 77562 GAGATGTGATTTTATCAAA 77580
||| ||||||||||||||
Sbjct 32709 TAGAAGTGATTTTATCAAA 32691
>seq627
Length=179744
Score = 349 bits (386), Expect = 5e-91
Identities = 625/905 (69%), Gaps = 16/905 (2%)
Strand=Plus/Minus
Query 46320 TTGTGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTT 46379
|| || |||||| || |||||| || ||| || | ||| || || ||||| |||||
Sbjct 173553 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 173494
Query 46380 GCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAttttttt 46439
||| | ||||| |||||||||||||||||||| ||||| | |||||||||| |||||
Sbjct 173493 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTC 173434
Query 46440 AAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTC 46499
| |||||| | | | |||||| ||||| ||||| | ||| ||||||| | |
Sbjct 173433 ATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGC 173374
Query 46500 ACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559
| |||||| |||| | || || | || || || | | || ||||||||
Sbjct 173373 AGCATTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGA 173314
Query 46560 GACAGCATCCGATATTATCGATGTTACTG---TTTCCTCACTTGGTGGATGCATCAAATG 46616
||||| || | || || | || | | ||| | |||| || ||||||
Sbjct 173313 AACAGCTTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATG 173257
Query 46617 TTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTT 46676
|| ||| | || ||||||||||||| || || ||||||||||||| ||| ||||| ||
Sbjct 173256 TTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATT 173197
Query 46677 AGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGA 46736
||||| || | || ||||| | || || || | |||||| || || || || ||
Sbjct 173196 TGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGA 173137
Query 46737 TCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGC 46796
|| |||||||| | ||||| ||||| || ||||| || | ||| || | | ||
Sbjct 173136 ACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGC 173077
Query 46797 ATCATTAT---GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTT-ACACAAGGCATTG 46852
||| | || ||||||| || |||||| ||||| ||||||||| | || || |
Sbjct 173076 ATCTTCATCTTGAATCCATCTAATAGCCCATTCAGC-TTTTTCTTTGATTTGTGGAATAG 173018
Query 46853 TTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA 46912
|||| |||||||| || | || | |||| | |||||| | ||| ||||| || |
Sbjct 173017 TTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA 172958
Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972
|||| ||| |||| ||| || ||||| || || || || ||||||||||||
Sbjct 172957 AAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATT 172898
Query 46973 TTGCTTCAGTAATCTGTACCTCTGTACA-AAATCGTTCAGACAAATTCTCATTCACTATT 47031
| ||||| | |||||| || || | || |||| | || |||||||||||| || ||
Sbjct 172897 TAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCAC-CAAATTCTCATTGACAATC 172839
Query 47032 CCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTC 47091
||||| |||||| |||||||| || || |||| ||| || |||||| | ||
Sbjct 172838 CCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTC 172779
Query 47092 AGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAAT 47148
| | ||||||||||| | ||||||||| || | ||| | |||||| || ||||| |||
Sbjct 172778 ATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAAT 172719
Query 47149 GACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACA 47208
|| || || || ||| || | ||| || ||| | |||| ||| ||||| | ||||
Sbjct 172718 GAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACA 172659
Query 47209 AATCT 47213
|||||
Sbjct 172658 AATCT 172654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712927796445120
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