Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq596 168 1e-36 seq506 158 3e-33 seq631 143 6e-29 >seq596 Length=25494 Score = 168 bits (186), Expect = 1e-36 Identities = 147/183 (80%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||||||||||| | || | ||||| || | |||||| || ||||| Sbjct 11959 TTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 12018 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| || ||||||||||| || ||||| ||| | Sbjct 12019 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTT 12078 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 |||||| ||||| || | ||||||||| |||||||| |||||||| || || || || || Sbjct 12079 ATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGAC 12138 Query 283088 GAA 283090 || Sbjct 12139 AAA 12141 >seq506 Length=5049 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||||||||||| | || | ||||| || | |||||| || ||||| Sbjct 1865 TTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 1806 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| || ||||| || ||||||||||| || ||||| || | Sbjct 1805 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATT 1746 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||||||||| | || || || ||||| |||||||| ||||| Sbjct 1745 GTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAAC 1686 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 1685 GAAAATTTGCATCTT 1671 >seq631 Length=151218 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | | ||| | ||| || || | ||||| || ||||| Sbjct 131367 TCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAA 131308 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | |||||||||| ||||| || || ||||| |||||||| | || ||| | Sbjct 131307 ATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTG 131248 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||| ||||| | ||||| || || || |||||||| ||||| Sbjct 131247 TCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGTTTTCCCAGTCAAAGTTTTAACA 131188 Query 283089 AATATCTGCATTTT 283102 || || |||||||| Sbjct 131187 AAAATTTGCATTTT 131174 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | | || | ||| || || | ||||| || ||||| Sbjct 131595 TCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAA 131536 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | |||||||||| ||||| || || ||||| |||||||| | || ||| | Sbjct 131535 ATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTG 131476 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||| ||||| | |||||| || || || ||||||||||| || Sbjct 131475 TCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTCACA 131416 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 131415 AAGATTTGCAT 131405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046729262192614