Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq627 342 5e-89 >seq627 Length=179744 Score = 342 bits (378), Expect = 5e-89 Identities = 618/897 (69%), Gaps = 9/897 (1%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| ||||||||| || ||| | | |||| || ||||| || ||||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 |||||| |||||||||||||||||||||||||| ||| |||||| | | ||| ||| | Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTA 173430 Query 23325 --TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382 |||| | || | ||||| || |||||||||| ||||||| |||||| || Sbjct 173429 CCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCA 173370 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || ||||||| || || || | ||||| | || || ||||||||| |||||| Sbjct 173369 TTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACA 173310 Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502 || || |||| ||| || | || | | ||| || || |||| | ||| Sbjct 173309 GCTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAAT 173250 Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 |||| ||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| Sbjct 173249 AATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAA 173190 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || || |||||||| || || ||| || | |||||| |||||||||||||| |||||| Sbjct 173189 GTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAA 173130 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682 ||||||| ||| |||||||| ||||| ||||| | | | | ||||| ||||| | | Sbjct 173129 AAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCA 173070 Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742 || ||||||| | | | ||| | ||| || ||| | ||| |||||||| Sbjct 173069 TCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATA 173010 Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTA 23802 || || || | || |||||| |||| | ||||| ||||| || | | | Sbjct 173009 GCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAA 172950 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862 || ||||| ||| |||||||| || || || ||||| ||||||||| ||||||| Sbjct 172949 TATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCT 172890 Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922 | | || || ||| | || | | | ||||| || || ||||| ||||| | Sbjct 172889 GGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAA 172830 Query 23923 GCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAAT-TT 23978 ||||| || || || | ||| | || ||| ||||||| ||| || || | || Sbjct 172829 GCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCA-TTCATTCTATT 172771 Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAA 24038 ||||| || | |||||||| || | ||| | ||| || | |||||||| || Sbjct 172770 ATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTC 172711 Query 24039 GGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 ||||| || || | |||| || |||| | || |||||||| | || ||||| Sbjct 172710 AGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521483169717400