Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq580 102 1e-16
seq671 100 4e-16
>seq580
Length=59395
Score = 102 bits (112), Expect = 1e-16
Identities = 132/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777
|||||| | | | | ||| || | ||| | || |||| ||||| || ||||| ||
Sbjct 5892 GTTAAAGTTAGAGTTAGAACTACCAAAGTGCCGCAAATTGGTGACAAGTTTGCCTCCAG- 5950
Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836
||| | |||||||||||| |||||| | ||| || |||||||||||| |||||
Sbjct 5951 ACACGGTCAAAAAGGTACCATTGGTATCACATATAGAAGAGAAGATATGCCATTTACGGC 6010
Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896
||| ||||| || || ||| | ||||||| ||||||||| |||| ||||||||| ||
Sbjct 6011 AGAAGGTATTGTTCCTGATTTGATCATCAACCCACACGCTATTCCATCTCGTATGACTGT 6070
>seq671
Length=59753
Score = 100 bits (110), Expect = 4e-16
Identities = 299/456 (66%), Gaps = 29/456 (6%)
Strand=Plus/Minus
Query 50464 ACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGC 50523
|||||| |||| ||| | || |||||||| || ||||| |||||||||||||||||
Sbjct 43227 ACAGAAGAGAAGGTGATCTTGGTCCTGTTTATGGGTTTCAGTGGAGACATTTTGGAGCAG 43168
Query 50524 GTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACT-GCAAAAA--A 50580
|||| | || |||| || || || || || ||| |||||||| || || |
Sbjct 43167 AATACAAGACATGTGACGACAACTATGATGGCCAGGGCTACGATCAACTTGCTGAAGTCA 43108
Query 50581 T-TATAACGACGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAAT 50639
| ||||| || ||||| ||||| |||| | | ||| | | | || ||||||
Sbjct 43107 TATATAA--AC--TGAAACATAACCCTTACGACAGAAGAATTATCTTAAGTGCTTGGAAT 43052
Query 50640 CCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCC 50699
|| | ||| | | ||| | ||| || || |||||||| || ||||||||||||
Sbjct 43051 CCTCCAGATTTCAAAAAAATGGCTTTGCCACCTTGTCATGTCTTCAGTCAATTTTATGTG 42992
Query 50700 AC---------------AGACAAT-GTTTTATCCTGTCAAT-GTTAT----CAAAGATCA 50738
| || | | || || || || ||| | ||||||||
Sbjct 42991 AGTTTTCCTAAGGAGGAAGGCGCTCGTCCTAAACTTTCGTGCGTTCTATACCAAAGATCC 42932
Query 50739 GCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTG 50798
|| ||||||||||| ||||| |||||| | || || || || || || || | ||
Sbjct 42931 TGCGACATGGGTTTAGGAGTTCCATTCAACATCGCATCCTATGCATTGTTGACCAAGATG 42872
Query 50799 ATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCAT 50858
|| || ||| |||||| | || || |||||||| || || || || ||||||||
Sbjct 42871 ATTGCCAAAGTTTGTGATATGGATCCTGGTGAATTTATCCACACTTTGGGGGACGCTCAC 42812
Query 50859 ATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAA 50894
|||| |||||||| || ||||| || || |||
Sbjct 42811 GTTTATAAAGATCACGTTGACGCTTTGAAAGAACAA 42776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667069021215960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |