Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq631 158 3e-33
seq506 152 1e-31
seq596 134 3e-26
seq622 120 7e-22
>seq631
Length=151218
Score = 158 bits (174), Expect = 3e-33
Identities = 172/228 (75%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| ||||||| || |||||| | || || ||||| |||||| | || || |||
Sbjct 131174 AAAATGC---AAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAA 131230
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||||||||||||||| |||||||| ||||| |||||||||||||| || || ||
Sbjct 131231 TCCTCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCT 131290
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||| || | || || || || |||||| | ||||| || || || | ||||
Sbjct 131291 GACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGAC 131350
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| ||||||| || || || || || | ||||||||| | |||
Sbjct 131351 TACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGA 131398
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| ||| | || || ||||| ||||| | || || ||| |||||||
Sbjct 131408 CAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCAGAC 131467
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||||||||| || || || ||||| |||
Sbjct 131468 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAA 131527
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || |||||| | ||||| || || || | |||| || ||| ||
Sbjct 131528 AGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAACATC 131587
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || || || | ||||||||| | |||
Sbjct 131588 CAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGA 131626
>seq506
Length=5049
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||| | ||||| ||||| || ||| | || || ||| ||| |||
Sbjct 1677 CAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTGAC 1736
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| || || || ||||||||||| ||||| || ||||| |||
Sbjct 1737 ACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAACAA 1796
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| | |||||||| || ||| | | || || ||| |
Sbjct 1797 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATT 1856
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||||| || || || | ||||||||| | |||
Sbjct 1857 CAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGA 1895
>seq596
Length=25494
Score = 134 bits (148), Expect = 3e-26
Identities = 158/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || ||||| | || || || || ||||| || || || ||| ||| ||||||||
Sbjct 12142 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 12083
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| ||||||||| || || || ||||||||||| || || || ||||| ||| || |
Sbjct 12082 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || ||||| | |||||||| || ||| | | || || ||| | |||||
Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963
Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| || || || | || |||||| | |||
Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGA 11929
>seq622
Length=83660
Score = 120 bits (132), Expect = 7e-22
Identities = 207/292 (71%), Gaps = 14/292 (5%)
Strand=Plus/Plus
Query 254275 AGACATGTCGATGGCTTGG--GAAAGTCCCGGTTCTCCCCCATACGGAATGTCAAAAATC 254332
||||| || || |||||| |||| || ||| |||||||| | ||| |||| ||||
Sbjct 33849 AGACAAATCAATAGCTTGGTTGAAA--CCGTTTTCACCCCCATAGGAAATATCAACAATC 33906
Query 254333 CCAAGAACTTTTGTTCGG-AGTCTTTGGTCGAAAAGGTCAGATT---CCAAAAGTTTTGT 254388
| || |||||| | | ||| | ||| || | ||||||| ||||| | ||
Sbjct 33907 TTCACAA-TTTTGTCAGCCAATCTGTTGTCAAACAAATCAGATTTAGCCAAA---TCGGT 33962
Query 254389 TTTGAACTCTGCCGCTCCCGCGATAACAATTCCGAGGACGTTGCATTTGTTGTCTTGT-A 254447
|||||| ||||| | ||||| | ||| | || ||| ||| ||||| || |||| |
Sbjct 33963 TTTGAAATCTGCTGAACCCGCTAGAACTAACCCTTTGACATTGACTTTGTCGT-TTGTGA 34021
Query 254448 TGAAGCATTGGGTTGCGTTCTCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTTC 254507
|||| |||| ||| || ||||||||||||| |||||||||||||||||||| ||
Sbjct 34022 TGAAATTTTGGACAGCGACTTCAGCGACTTTTCTCACATAGTTGTGTCTTTTTTCTTCTC 34081
Query 254508 GAAGTCTTTCGAACCGGAGGGCTGACTGTCCTCCTCGACCGTGTTTCTTTGG 254559
| | | || || ||||| || || || |||| |||||||||||||||
Sbjct 34082 TCAAACGAGCAAAACGAAGGGCGGATTGACCACCTCTACCGTGTTTCTTTGG 34133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203719771700754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |