Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq631 158 3e-33 seq506 152 1e-31 seq596 134 3e-26 seq622 120 7e-22 >seq631 Length=151218 Score = 158 bits (174), Expect = 3e-33 Identities = 172/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| ||||||| || |||||| | || || ||||| |||||| | || || ||| Sbjct 131174 AAAATGC---AAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAA 131230 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||||||||||||||| |||||||| ||||| |||||||||||||| || || || Sbjct 131231 TCCTCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCT 131290 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||| || | || || || || |||||| | ||||| || || || | |||| Sbjct 131291 GACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGAC 131350 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| ||||||| || || || || || | ||||||||| | ||| Sbjct 131351 TACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGA 131398 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| ||| | || || ||||| ||||| | || || ||| ||||||| Sbjct 131408 CAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCAGAC 131467 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||||||||| || || || ||||| ||| Sbjct 131468 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAA 131527 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || |||||| | ||||| || || || | |||| || ||| || Sbjct 131528 AGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAACATC 131587 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || || || | ||||||||| | ||| Sbjct 131588 CAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGA 131626 >seq506 Length=5049 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| |||||| | ||||| ||||| || ||| | || || ||| ||| ||| Sbjct 1677 CAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTGAC 1736 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || || || ||||||||||| ||||| || ||||| ||| Sbjct 1737 ACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAACAA 1796 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| | |||||||| || ||| | | || || ||| | Sbjct 1797 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATT 1856 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || || || | ||||||||| | ||| Sbjct 1857 CAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGA 1895 >seq596 Length=25494 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || ||||| | || || || || ||||| || || || ||| ||| |||||||| Sbjct 12142 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 12083 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| ||||||||| || || || ||||||||||| || || || ||||| ||| || | Sbjct 12082 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || ||||| | |||||||| || ||| | | || || ||| | ||||| Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| || || || | || |||||| | ||| Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGA 11929 >seq622 Length=83660 Score = 120 bits (132), Expect = 7e-22 Identities = 207/292 (71%), Gaps = 14/292 (5%) Strand=Plus/Plus Query 254275 AGACATGTCGATGGCTTGG--GAAAGTCCCGGTTCTCCCCCATACGGAATGTCAAAAATC 254332 ||||| || || |||||| |||| || ||| |||||||| | ||| |||| |||| Sbjct 33849 AGACAAATCAATAGCTTGGTTGAAA--CCGTTTTCACCCCCATAGGAAATATCAACAATC 33906 Query 254333 CCAAGAACTTTTGTTCGG-AGTCTTTGGTCGAAAAGGTCAGATT---CCAAAAGTTTTGT 254388 | || |||||| | | ||| | ||| || | ||||||| ||||| | || Sbjct 33907 TTCACAA-TTTTGTCAGCCAATCTGTTGTCAAACAAATCAGATTTAGCCAAA---TCGGT 33962 Query 254389 TTTGAACTCTGCCGCTCCCGCGATAACAATTCCGAGGACGTTGCATTTGTTGTCTTGT-A 254447 |||||| ||||| | ||||| | ||| | || ||| ||| ||||| || |||| | Sbjct 33963 TTTGAAATCTGCTGAACCCGCTAGAACTAACCCTTTGACATTGACTTTGTCGT-TTGTGA 34021 Query 254448 TGAAGCATTGGGTTGCGTTCTCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTTC 254507 |||| |||| ||| || ||||||||||||| |||||||||||||||||||| || Sbjct 34022 TGAAATTTTGGACAGCGACTTCAGCGACTTTTCTCACATAGTTGTGTCTTTTTTCTTCTC 34081 Query 254508 GAAGTCTTTCGAACCGGAGGGCTGACTGTCCTCCTCGACCGTGTTTCTTTGG 254559 | | | || || ||||| || || || |||| ||||||||||||||| Sbjct 34082 TCAAACGAGCAAAACGAAGGGCGGATTGACCACCTCTACCGTGTTTCTTTGG 34133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203719771700754