Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq4 104 5e-17 >seq4 Length=1381050 Score = 104 bits (114), Expect = 5e-17 Identities = 291/440 (66%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC-ATCTTTTGGCTGCGGAACAAAGG 230261 || ||||||||| | || || || || ||| | ||||| ||| || ||| | ||| Sbjct 294291 GTCGAAGGTATTTTCTTCTCTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGG 294349 Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321 | |||||||||| | | | || |||||||| ||| |||| ||||| ||| | || || Sbjct 294350 TAAGATGCCTGGCTTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCA-CA 294408 Query 230322 ACAGTTCGGCGAGCTTAT-GTATTCAAAGCTCCAGAACAAGCTA---CCATTCGAGACGG 230377 | | || |||| | || || | | || |||| | | ||| | | | Sbjct 294409 CCGACTTTGCCTGCTTGTTGTTCTCCCACTTGCAAAACAGACCAAACCCAACC---ATTG 294465 Query 230378 TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTC 230437 | || | |||||||| ||||| ||| | |||||| || ||| | || ||| | | Sbjct 294466 TTGAAAAGATCATTACCGAAGCTGTTTCCATCGAAAAAGAATTCTTCACCGATGCTTTGC 294525 Query 230438 CATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCG 230497 |||| || | | || |||||| || | ||| | || ||| | || ||||| |||| Sbjct 294526 CATGCAGCTTGTTGGGTATGAACAAGGACTTGATGTGCCAATACGTTGAGTTCGTCGCCG 294585 Query 230498 ACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCAT 230557 || | | || ||||| | ||| |||| || | |||||| | ||||| || | | Sbjct 294586 ACAGATTGTTGGTTGCCTTGGGTAACGAAAAGTTCTACAACGTCACCAACCCATTCGACT 294645 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 | ||||| ||| || | || ||||||||||||||||||||| | |||||||| | Sbjct 294646 TCATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTCAGTGATT 294705 Query 230618 ATCAGAGGCCTGGTGTGATG 230637 | || | | | ||||| ||| Sbjct 294706 ACCAAAAGGCCGGTGTCATG 294725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823891573040