Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq4 291 1e-73 >seq4 Length=1381050 Score = 291 bits (322), Expect = 1e-73 Identities = 814/1236 (66%), Gaps = 20/1236 (2%) Strand=Plus/Plus Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 ||||||| ||||||||||||||||| | | || | || | ||||| | ||| Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016 Query 53501 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 53559 ||||| ||| |||| || || ||||| || | ||||| ||||| | | | || || Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075 Query 53560 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 53619 ||||| |||| | ||||| | |||||||| | || || || ||| || || || Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135 Query 53620 TTTATTGAGGTTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 53669 | | || | ||| | |||||| ||| | || | | |||| ||| | | Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195 Query 53670 AATCAAATTGTCCATCTATT---ACAAAC-ATGTTCAATGCAATAGATGCCAGATTACAA 53725 | | | || | |||| || |||||| ||| ||| || || || |||| |||||| Sbjct 121196 AGACGAGGTGGC-ATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253 Query 53726 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 53785 || || || || | | | | ||||| | || ||| ||| | || | ||||| Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313 Query 53786 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 53845 ||| | || || || | ||| || |||| |||||||| ||||| || || | |||||| Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373 Query 53846 GGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATT 53905 || ||||| ||||| | || | ||| | || | | ||| | | ||||| | Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433 Query 53906 ATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCC 53965 | | || ||| ||||||||||||||| | |||||| |||| || ||||| || Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493 Query 53966 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 54025 |||||| |||| |||||| || | ||| | | | | |||||| |||| | Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553 Query 54026 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 54085 | || || ||||| || ||||||||||||||||| ||| || |||||||| | ||| Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613 Query 54086 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 54145 ||| || || || ||||||| | | |||| ||| | | || || || ||||| Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673 Query 54146 GGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 54205 ||||||||||| | || | | | ||||| | ||||| || || || || | ||| | Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733 Query 54206 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCG 54265 || ||||| || | || | | ||| || || ||||| ||||| | ||| ||||| || Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793 Query 54266 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATT 54325 | || || ||| | ||| || || || | ||| || || || || Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853 Query 54326 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 54385 || ||||| || || || ||| || || || ||||| || || || || || || Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913 Query 54386 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 54445 ||| | || ||||| |||||||| || | ||| || || || || | ||| Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973 Query 54446 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCT 54505 || || |||| || || | ||| ||| | || ||||| ||||| ||| | || Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033 Query 54506 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 54564 || || || | || || || || ||||| | ||| | || |||||||||||||||| | Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092 Query 54565 GATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 54624 || ||| ||| ||| ||| |||||| ||| |||||||||| || ||||| || ||||| Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152 Query 54625 GTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660 ||| ||||| || ||| ||| ||| | ||||| Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188 Score = 187 bits (206), Expect = 3e-42 Identities = 569/871 (65%), Gaps = 35/871 (4%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| |||| || | |||||||| || || || ||||| | || || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT-CCCAATTCAGAAAT 23962 |||||||| ||| |||| ||||| || || |||| ||||| | ||||| || | Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAA-CTTTTCGTTACCCAAGGCAACCAA 294594 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 24021 |||||| || ||||| ||||| | ||| ||||| || ||||| || | || Sbjct 294593 CAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACAA 294534 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 | | | ||| | ||| | || | ||||||| ||| || || || || || || || Sbjct 294533 GCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT-- 294477 Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAAT---------AAATGTTTAAACATCA 24132 |||||| ||| || | | ||| | | || || |||| || Sbjct 294476 --GATCTT-----TTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAACA 294424 Query 24133 AACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGA 24192 | || || || ||| ||| | ||| ||||| | || || || |||||||| || || | Sbjct 294423 AGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCA 294364 Query 24193 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGA 24252 || ||||| || | ||| || | ||| || || || ||||| || ||||| |||| Sbjct 294363 AGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGA 294304 Query 24253 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCAT 24309 |||| ||||| || || |||||||||| | |||||| || | | || || |||| Sbjct 294303 AAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCAC 294244 Query 24310 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 24369 ||||| | |||||| ||||||||||| || | || || || | || || || | Sbjct 294243 TAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGT 294184 Query 24370 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TAC 24428 | || | ||| ||| || ||| || | || || |||||||| | || | || Sbjct 294183 TGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAA 294125 Query 24429 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 24488 |||| || || |||||||| || ||||| || |||||||||||| | || || || Sbjct 294124 GTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTG 294065 Query 24489 ATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548 | ||| ||||| | || ||| | || ||||| || || || || ||| ||| Sbjct 294064 ACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCA 294005 Query 24549 GCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTATT 24604 ||||| || ||||| | || | || || || |||||| || | | || Sbjct 294004 GCAAAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTT 293949 Query 24605 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 24664 ||| || | | | |||||| | || | ||||| | ||||| || || || || || Sbjct 293948 CCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGC 293889 Query 24665 CTTTTTATACATATTCCAGATGTCATGATAT 24695 || || ||||| | |||||| || || ||| Sbjct 293888 TTTCTTGTACATTTGCCAGATCTCGTGGTAT 293858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721540627840