Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq6 118 9e-22
seq1 113 4e-20
>seq6
Length=1120317
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
||||||||||| ||| |||| || ||||| || || ||||||||| ||| ||| |
Sbjct 961473 AAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCGAATCT 961532
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | | | || || || || || |||||| | || |||
Sbjct 961533 TCCGACACCATCGACAACGTTAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCAGAC 961592
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| |||||| | |||||||| || || ||||||||||| || ||| || |||| |||
Sbjct 961593 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTAC 961652
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||||||||||||| |||| || |||| |||| ||
Sbjct 961653 AACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 961702
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| | || || ||||| || || ||||||||| ||| ||| | |
Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| |||||| || || |||||| | || ||| ||
Sbjct 962220 GACACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 962279
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | |||||||| || || ||||||||||| || ||| || |||| |||||
Sbjct 962280 CAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAAC 962339
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||| ||||| ||| |||| || |||| |||| ||
Sbjct 962340 ATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 962386
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| | || || ||||| || || ||||| || ||| ||| | |
Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | |||| || || || || |||||| | || ||| ||
Sbjct 961992 GACACCATTGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 962051
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | |||||||| || |||||||||||||| | |||| | | || |||||
Sbjct 962052 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 962111
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||||||||||||| |||| || |||| |||| ||
Sbjct 962112 ATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 962158
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| || |||| || ||||| || || ||||| || ||| ||| || |
Sbjct 962388 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCC 962447
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| ||||| || || |||||| | || ||| ||
Sbjct 962448 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 962507
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||||||||||| || |||| | | || |||||
Sbjct 962508 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACAAC 962567
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| |||||||||||||| || ||| |||| || |||| |||| ||
Sbjct 962568 ATCCAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGAGGTGG 962614
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| || |||| || ||||| || || ||||| || ||| ||| | |
Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| ||||| || || |||||| | || ||| ||
Sbjct 961764 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961823
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || || || || || ||||||||||| || |||| | | || |||||
Sbjct 961824 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAAC 961883
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||| ||||| || |||||| |||| || |||| |||| ||
Sbjct 961884 ATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 961930
>seq1
Length=2570408
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || ||||||||| ||| || ||
Sbjct 1137443 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1137384
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||| || || || ||||||||| | || |||
Sbjct 1137383 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGAC 1137324
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| |||||| | |||||||| || || |||||||||||| | ||| || | || |||
Sbjct 1137323 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTAC 1137264
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||| || || |||||| ||||||| |||| |||| ||
Sbjct 1137263 AACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGG 1137214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796759947312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |