Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 140 7e-28 >seq4 Length=1381050 Score = 140 bits (154), Expect = 7e-28 Identities = 282/411 (69%), Gaps = 27/411 (7%) Strand=Plus/Minus Query 253991 AACTGGCGA-CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAA 254049 |||||| || ||| || || |||| ||| |||| ||||||||||| ||||||||||| | Sbjct 836438 AACTGGGGAACCTACCACACATGCTCTTCTACGGGCCTCCCGGAACCGGCAAGACGTCGA 836379 Query 254050 CCATCCTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAAC--ATGAGAGA-GCGCGTGC 254106 | | ||||| ||||| | | |||| || | || || || ||| |||| Sbjct 836378 CGGTGTTGGCGTTGGCC---AAGCAGTTGTACGGTCCGCACTTATACAAGCTGCGGGTGC 836322 Query 254107 TCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CT 254165 ||||||| ||| | ||||||||| | || | | |||| | | |||||||||| || Sbjct 836321 TCGAGCTCAACTCGTCTGACGAAAGAGGCATTTCCATCGTGAGGCAGAAGATCAAGAACT 836262 Query 254166 TTC-----TCCAAGATGTCGATTTCGTCG---------TT--CCAAC--CCGGCTGTCCG 254207 || |||| || || | | || || ||||| || | || ||| Sbjct 836261 TTGCCCGGTCCACCATTTCCAACGCCTCCAAAGAGGACTTGGCCAACTACCCG-TGCCCG 836203 Query 254208 CCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCC 254267 |||| |||| || | || |||||||||||||| |||||||| ||||| ||| |||| Sbjct 836202 CCTTACAAGATCATCATATTGGACGAGGCGGACTCCATGACGAAAGACGCCCAGGCCGCG 836143 Query 254268 CTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTAC 254327 | | |||||||||| | || ||| ||||| || || ||| || | ||||||||| Sbjct 836142 TTGAGAAGAACGATGGAAAACTACGCCGGCGTGACCCGGTTCTGCTTGATCTGCAACTAC 836083 Query 254328 GTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTC 254378 | | |||||||| |||| |||| || |||||| ||||||| || ||| Sbjct 836082 ATCACCCGGATCATCGACCCGTTGGCGTCGCGGTGCTCCAAGTTCCGGTTC 836032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766289938944