Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 7e-30
>seq4
Length=1381050
Score = 145 bits (160), Expect = 7e-30
Identities = 480/734 (65%), Gaps = 18/734 (2%)
Strand=Plus/Minus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||||| ||||| ||||| |||||||| || ||||| ||| || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAATA 14030
||||| || || ||||| || || ||| | | ||||| || ||| | | | |
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGT-GACGTTGTAGAACTTT-TCGTTACCCAAGGCAACCA 294595
Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090
||||| || || | |||||||| ||||| |||| || || |||||||| | |
Sbjct 294594 ACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACA 294535
Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150
| || | || ||| || ||||||||||| || || ||||| ||| | || |
Sbjct 294534 AGCTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATGA 294475
Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAA--CACGC 14208
| | || ||| || | | | |||| | || | || | | || ||
Sbjct 294474 TCTTTTCAACAATGG--TTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAGGC 294417
Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268
||| || || | || || || | || || | ||||| || || || || || ||
Sbjct 294416 AAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAGG 294357
Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328
|||| |||| || || ||||| || || | ||| || || || || ||||| || ||
Sbjct 294356 CATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATACC 294297
Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388
|| || || ||||| || | |||| ||| || ||| | || | | || |||||
Sbjct 294296 TTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATCCA 294237
Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448
| | |||||| || | || || || || | || | || || || || || ||
Sbjct 294236 TCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAACAA 294177
Query 14449 ATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505
|| |||| |||| | | ||||| |||| || ||||| | ||| || ||||
Sbjct 294176 GAAGTCAGCTTC-CTTTGGATCCTTGA--TGTAGGTGTCAATCAATAACGAGTAAGTTTC 294120
Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCAT 14563
||||| ||||||||||| || || ||||| || |||||| | ||||| |||||
Sbjct 294119 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACC-- 294062
Query 14564 TGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623
|| || || ||| | || ||||| |||| ||||| || || ||||||||| || |||
Sbjct 294061 TGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCA 294002
Query 14624 AAAAATGCCAATAT 14637
|| || ||||| ||
Sbjct 294001 AAGAAGGCCAAGAT 293988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345551765440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |