Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 8e-16
seq1 98.7 8e-16
>seq6
Length=1120317
Score = 98.7 bits (108), Expect = 8e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||||| || ||| | | ||||||
Sbjct 961684 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCC 961625
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | |||||| || || || | |||||||| ||
Sbjct 961624 AATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGG 961565
Query 18237 ATTTGTTGCTTGACCTGTG-CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295
|| | | | || | | || | | ||||| | ||| ||| | ||| ||| | ||
Sbjct 961564 ATCT-TGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTT 961506
Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|||||||| || || || ||||||||||||||
Sbjct 961505 ACCGGTCAAGGTCTTGACGAAAATTTGCATTTT 961473
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||||| || ||| | | ||||||
Sbjct 962368 ACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCC 962309
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | |||||| || || || | |||||||| || |
Sbjct 962308 AATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGA 962249
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| |||||| | | | ||||| | ||| ||| | ||| ||| | ||
Sbjct 962248 ATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTA 962189
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| ||||| || || || || ||||||||
Sbjct 962188 CCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | | ||| ||| ||||||
Sbjct 962140 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCC 962081
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| |||| | |||||| || || || | |||||||| || ||
Sbjct 962080 AATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGG 962021
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| ||||| | || ||| | |||||| | |
Sbjct 962020 ATCTTGGAT--TTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCT 961963
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| |||||||| || || || || ||||||||
Sbjct 961962 TACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||||||||| ||||||||||| | | ||| | | ||||||
Sbjct 961912 ACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCTTCC 961853
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || || | || | |||||| || || || | |||||||| ||
Sbjct 961852 AATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGG 961793
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| |||||| | | | ||||| | || ||| | |||||| | ||
Sbjct 961792 ATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTA 961733
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || ||||| ||||||||
Sbjct 961732 CCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||| | | ||| | | ||||||
Sbjct 962596 ACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCCGTCTTCC 962537
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || || |||| | |||||| || || || | |||||||| ||
Sbjct 962536 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGG 962477
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| |||||| | | | ||||| || || ||| | |||||| | ||
Sbjct 962476 ATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGATGGTCTTA 962417
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || ||||| ||||||||
Sbjct 962416 CCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
>seq1
Length=2570408
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || || || ||||| ||||||||||| | || ||| ||| |||||||
Sbjct 1137232 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCC 1137291
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | |||||| || || || | ||||| || ||
Sbjct 1137292 AATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGG 1137351
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | | | ||||| || |||| ||| | ||| ||| | ||
Sbjct 1137352 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTA 1137411
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 1137412 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 1137443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343963013960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |