Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 161 2e-34 >seq4 Length=1381050 Score = 161 bits (178), Expect = 2e-34 Identities = 376/561 (67%), Gaps = 16/561 (3%) Strand=Plus/Plus Query 101820 TCTTGTTTAACGC--TGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTAT 101877 ||||||| ||||| | |||||| |||| |||||||||||||| | |||||| | Sbjct 294175 TCTTGTTCAACGCCATCGACAACA--TCCCATGCATCAAGAAGAAGGCCGACTGGGCTTT 294232 Query 101878 TAATTGGATGCAAAGCAATAACGATTTGG-CGG--AACTAATTGTTGCCTTTGCTGCAGT 101934 | ||||| | | ||| |||| ||| || | | ||||||||||| || || Sbjct 294233 GAGATGGATTAGTGACGACGACGCTTTGTTCGGTGAAAGATTGGTTGCCTTTGCCGCCGT 294292 Query 101935 TGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTAT 101994 ||||| || ||||| |||| | || || || || |||||| | ||||| || |||| Sbjct 294293 CGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTAA 294352 Query 101995 TTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGA 102054 ||||||| | || | |||||| ||||| || | | | ||||||||| | || ||| Sbjct 294353 GATGCCTGGCTTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCACACCGA 294412 Query 102055 CTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCT 102114 |||||| ||| || |||| | ||| | | | | ||| || ||| | Sbjct 294413 CTTTGCCTGCTTGTTGTTCTCCCA----CTTG--CAAAACAGACCAAACCCAACCATTGT 294466 Query 102115 TGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCC 102171 |||| || | || ||||| || || ||| ||||||| |||| | | | |||| Sbjct 294467 TGAAAAGATCATTACCGAAGCTGTTTCCATCGAAAAAGAATTCTTCACCGATGCTTTGCC 294526 Query 102172 TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231 | || |||| |||||| | |||||| |||| ||| |||| || || || || Sbjct 294527 ATGCAGCTTGTTGGGTATGAACAAGGACTTGATGTGCCAATACGTTGAGTTCGTCGCCGA 294586 Query 102232 TAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATT 102291 | | | ||||||| |||| |||||| ||| || || |||||||| ||| || Sbjct 294587 CAGATTGTTGGTTGCCTTGGGTAACGAAAAGTTCTACAACGTCACCAACCCATTCGACTT 294646 Query 102292 CATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTA 102351 |||||| || || ||| | | |||||||||||| || |||||||||||| || || Sbjct 294647 CATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTCAGTGATTA 294706 Query 102352 TCAACGTGCCCAGGTCATGGC 102372 ||| ||| |||||||| Sbjct 294707 CCAAAAGGCCGGTGTCATGGC 294727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583898567640