Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4 302 6e-77 >seq4 Length=1381050 Score = 302 bits (334), Expect = 6e-77 Identities = 597/881 (68%), Gaps = 2/881 (0%) Strand=Plus/Plus Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078 ||||||| | || || || | ||| || |||| |||||||| ||||| || || | | Sbjct 121309 ACTTGATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACA 121368 Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138 ||||||||||||| ||||| | || | ||| | || | | ||| | | | |||| Sbjct 121369 TGAATGGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCT 121428 Query 63139 TTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198 | | | | || ||| |||||||||||||| |||||| ||||||| |||| Sbjct 121429 TAACAGTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGT 121488 Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258 | || |||||| |||| | |||| || | ||| | | | | |||||| |||| Sbjct 121489 CACCGTAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGT 121548 Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318 | | || || ||||| || ||||||||||||||||| ||| || |||||||||| Sbjct 121549 TTTGTTCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTG 121608 Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378 ||| ||| || || || ||||||| | | |||| ||| | | || || || | Sbjct 121609 CTCTGATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGT 121668 Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438 |||| ||||||||||| | ||| | | | ||||| | ||||| || || || || | || Sbjct 121669 GCCAAGGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGT 121728 Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498 | | || ||||| || | || | | ||| || || |||||||| || |||| |||| Sbjct 121729 AACGGGCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGG 121788 Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558 |||| | || || | ||| | ||| || || || | ||| || || || | Sbjct 121789 TACCAGCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGG 121848 Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618 | || ||||| || || || ||| || ||||| ||||| || || || || | Sbjct 121849 CAGACTTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTT 121908 Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678 | ||||| | || ||||| |||||||| || || ||| || || || || | Sbjct 121909 CTTTCATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAA 121968 Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63738 ||||| || |||| || || | ||| ||| | || ||||| ||||||||| | Sbjct 121969 GAGTAGGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACAC 122028 Query 63739 AGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797 || || || || | || || || || ||||| | ||| | || ||||||||||||| Sbjct 122029 GTTCGATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTT 122087 Query 63798 TCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63857 ||| | | |||| ||| ||| |||||||||| ||| |||||||||| || ||||| || Sbjct 122088 TCAGCGACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAG 122147 Query 63858 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 |||||||| ||||| || ||| ||| ||| |||| || Sbjct 122148 TAGTTGTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188 Score = 187 bits (206), Expect = 3e-42 Identities = 596/916 (65%), Gaps = 25/916 (3%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| |||| || | |||||||| || || || || || |||| || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTA-AAttttt--ttAAATCCCAATTCAGAA 33407 |||||||| || || || ||||| || ||||| || |||| ||| ||||| || Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596 Query 33408 ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATG 33467 | |||||| || |||||||| || | ||| ||||| || ||||| || | Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536 Query 33468 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATA 33527 | | ||| | ||| | || | ||||||| ||| ||||| || || | || || Sbjct 294535 AAGCTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATG 294476 Query 33528 ATAAATCTAAC---GGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACAT 33584 || | ||| |||| | | ||| | | || || |||| ||| || Sbjct 294475 ATCTTTTCAACAATGGTTGGGT---TTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAG 294419 Query 33585 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCG 33644 || || ||| ||||| ||| ||||| | || || || ||||| || || || | || Sbjct 294418 GCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCA 294359 Query 33645 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATT 33704 ||||| || | ||| || | ||| || || ||||| || || || || ||||| || Sbjct 294358 GGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATA 294299 Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATC 33761 ||||| || || |||||||||| | ||| || || | | || || |||| ||| Sbjct 294298 CCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATC 294239 Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821 || | |||||| ||||||||||| || | || || || | || ||||| || || Sbjct 294238 CATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAAC 294179 Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA-TACATTTC 33880 | ||| ||| || ||| || | || || || ||||| | || | || |||| Sbjct 294178 AAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAAGTTTC 294120 Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33940 || || |||||||| || || || || |||||||||||| | || || || | ||| Sbjct 294119 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACCTG 294060 Query 33941 CACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAA 34000 |||||| | | || ||| | || ||||| || || || |||||| ||| ||||| Sbjct 294059 CACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCAAA 294000 Query 34001 AAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAAT 34056 || ||||| | || | || || || |||||| || | | ||||| | Sbjct 293999 GAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCAGT 293944 Query 34057 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 34116 | | | | |||||| | || | ||||| | ||||| || || || || || || | Sbjct 293943 CTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCT 293884 Query 34117 TATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTG 34176 | ||||| | |||||| || || ||| || ||||| || || | | | | || ||| Sbjct 293883 TGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCACGTAACGACTAGGGTTTT 293824 Query 34177 GTGCAAGGATAGGTTC 34192 | ||| | |||||| Sbjct 293823 CTTTAAGCAAAGGTTC 293808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817537018240