Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4 302 6e-77
>seq4
Length=1381050
Score = 302 bits (334), Expect = 6e-77
Identities = 597/881 (68%), Gaps = 2/881 (0%)
Strand=Plus/Plus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
||||||| | || || || | ||| || |||| |||||||| ||||| || || | |
Sbjct 121309 ACTTGATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACA 121368
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
||||||||||||| ||||| | || | ||| | || | | ||| | | | ||||
Sbjct 121369 TGAATGGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCT 121428
Query 63139 TTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198
| | | | || ||| |||||||||||||| |||||| ||||||| ||||
Sbjct 121429 TAACAGTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGT 121488
Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258
| || |||||| |||| | |||| || | ||| | | | | |||||| ||||
Sbjct 121489 CACCGTAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGT 121548
Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318
| | || || ||||| || ||||||||||||||||| ||| || ||||||||||
Sbjct 121549 TTTGTTCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTG 121608
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
||| ||| || || || ||||||| | | |||| ||| | | || || || |
Sbjct 121609 CTCTGATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGT 121668
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| ||||||||||| | ||| | | | ||||| | ||||| || || || || | ||
Sbjct 121669 GCCAAGGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGT 121728
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
| | || ||||| || | || | | ||| || || |||||||| || |||| ||||
Sbjct 121729 AACGGGCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGG 121788
Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558
|||| | || || | ||| | ||| || || || | ||| || || || |
Sbjct 121789 TACCAGCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGG 121848
Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618
| || ||||| || || || ||| || ||||| ||||| || || || || |
Sbjct 121849 CAGACTTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTT 121908
Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678
| ||||| | || ||||| |||||||| || || ||| || || || || |
Sbjct 121909 CTTTCATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAA 121968
Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63738
||||| || |||| || || | ||| ||| | || ||||| ||||||||| |
Sbjct 121969 GAGTAGGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACAC 122028
Query 63739 AGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797
|| || || || | || || || || ||||| | ||| | || |||||||||||||
Sbjct 122029 GTTCGATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTT 122087
Query 63798 TCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63857
||| | | |||| ||| ||| |||||||||| ||| |||||||||| || ||||| ||
Sbjct 122088 TCAGCGACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAG 122147
Query 63858 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
|||||||| ||||| || ||| ||| ||| |||| ||
Sbjct 122148 TAGTTGTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188
Score = 187 bits (206), Expect = 3e-42
Identities = 596/916 (65%), Gaps = 25/916 (3%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| |||| || | |||||||| || || || || || |||| || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTA-AAttttt--ttAAATCCCAATTCAGAA 33407
|||||||| || || || ||||| || ||||| || |||| ||| ||||| ||
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596
Query 33408 ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATG 33467
| |||||| || |||||||| || | ||| ||||| || ||||| || |
Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536
Query 33468 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATA 33527
| | ||| | ||| | || | ||||||| ||| ||||| || || | || ||
Sbjct 294535 AAGCTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATG 294476
Query 33528 ATAAATCTAAC---GGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACAT 33584
|| | ||| |||| | | ||| | | || || |||| ||| ||
Sbjct 294475 ATCTTTTCAACAATGGTTGGGT---TTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAG 294419
Query 33585 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCG 33644
|| || ||| ||||| ||| ||||| | || || || ||||| || || || | ||
Sbjct 294418 GCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCA 294359
Query 33645 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATT 33704
||||| || | ||| || | ||| || || ||||| || || || || ||||| ||
Sbjct 294358 GGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATA 294299
Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATC 33761
||||| || || |||||||||| | ||| || || | | || || |||| |||
Sbjct 294298 CCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATC 294239
Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
|| | |||||| ||||||||||| || | || || || | || ||||| || ||
Sbjct 294238 CATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAAC 294179
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA-TACATTTC 33880
| ||| ||| || ||| || | || || || ||||| | || | || ||||
Sbjct 294178 AAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAAGTTTC 294120
Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33940
|| || |||||||| || || || || |||||||||||| | || || || | |||
Sbjct 294119 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACCTG 294060
Query 33941 CACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAA 34000
|||||| | | || ||| | || ||||| || || || |||||| ||| |||||
Sbjct 294059 CACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCAAA 294000
Query 34001 AAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAAT 34056
|| ||||| | || | || || || |||||| || | | ||||| |
Sbjct 293999 GAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCAGT 293944
Query 34057 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 34116
| | | | |||||| | || | ||||| | ||||| || || || || || || |
Sbjct 293943 CTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCT 293884
Query 34117 TATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTG 34176
| ||||| | |||||| || || ||| || ||||| || || | | | | || |||
Sbjct 293883 TGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCACGTAACGACTAGGGTTTT 293824
Query 34177 GTGCAAGGATAGGTTC 34192
| ||| | ||||||
Sbjct 293823 CTTTAAGCAAAGGTTC 293808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817537018240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |