Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4 122 8e-23 >seq4 Length=1381050 Score = 122 bits (134), Expect = 8e-23 Identities = 1056/1707 (62%), Gaps = 25/1707 (1%) Strand=Plus/Plus Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTG 36922 |||| ||||| ||||||||| |||| || | ||||| | | || | || Sbjct 120388 TCCAACCGTAGAAATGCATAGAAGTCAACTTACCCATGGTAGGGTCCTTGATGTGAATGT 120447 Query 36923 TCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATT 36982 ||| |||||| |||||| || || || |||||||||| ||||| || | ||| || Sbjct 120448 TCAATGATTGCGATTGATCAATGAAGGCTGCTCTGTCGGCAGCCATATCGATGATATGTT 120507 Query 36983 TTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATC---TA 37039 ||||| || ||||| ||||| || || | | || || | || || | | || Sbjct 120508 TTTGACTGATTTCCCACACCGTCTTGTACAATGCCTTGATTTGGTCGGGAACGTTAGGTA 120567 Query 37040 AATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATAT 37099 | || |||||||| || | | | || | ||||| || ||| ||||| | | Sbjct 120568 AGCCCTGGATAGAACCGTTGTTGGAAATGATGTTGTTCTTCATAGCATCGTTCCAGAGAC 120627 Query 37100 TTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATA 37159 | | | || | ||| | || |||||| |||| ||| || || |||| || | Sbjct 120628 CGAGATCAACCAAGTCACGCAACAAGTATGGATTAACAATCTGGAATTCACCAGCCAACA 120687 Query 37160 CTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTT 37219 ||||||| | || || ||| ||| |||||||| | | || || |||| || |||| Sbjct 120688 CTCTTCTAGAGTAGATGTTGGAAGTGTATGGTTCGAAACATTCGTTGTTACCCAAAATTT 120747 Query 37220 GAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTAT 37279 | || || || ||||| |||||||| || | | | ||||| || || || | Sbjct 120748 GGGACGTGGAAGCAGTTGGCATTGGAGCAACCAACAACGAGTTTCTTAAACCGTGCTTGG 120807 Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATAT 37339 || ||| ||| | | ||| ||||| || || | ||| || | ||||| | Sbjct 120808 CCATATTCTGTTTCAAGGTGTCCCAGTCCCACAATTCAGATGGCTTTCTGTCCCACAAGT 120867 Query 37340 CATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAA 37399 | |||| | | ||| || ||||||||| | | | || || |||| || | | Sbjct 120868 CGAATTGCAACAAACCCTTGGAAGCTGGAGAACCTTCGAAAGTTTCGTAAGCACCTTCAG 120927 Query 37400 TTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTA 37459 || || | ||| |||||| | || | | || || |||||||| ||||| | Sbjct 120928 CTTCGGCCAACTCGATGGAAGATTCAACAGCACCGTGGTAAATGGTTTCGAAGATTTGAA 120987 Query 37460 TATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAG 37519 | || ||| || ||||||| || |||| | | | || || | |||| Sbjct 120988 TGTTCAATTCCTTGGCTTCTTGAGAGTCAAATGGTAAACGGAGAGCCATGAAGGCGTCAG 121047 Query 37520 CCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTA 37579 | | ||| || ||||||| | | || ||||||| | || | ||||| | | |||| Sbjct 121048 CAAGACCTTGCACACCGAGAGCAATTGGTCTATTTCTCATGTTAGAACGCTTGGCTTCTG 121107 Query 37580 TCACTGGATAATAATTGATATCTATTATTTTATTTA------GATTTTTAAC--TAGTAT 37631 |||||| || || || || || ||| | || | || | ||| ||||| Sbjct 121108 GCACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTACGAGTGACAACCTTAGTAA 121167 Query 37632 TTTC--GTAATTATTCTCAACTTGTCGAACATAAATACGT----TATTATT-AACAAATT 37684 ||| |||| | ||| || |||| | || | | || | || || |||||| Sbjct 121168 CTTCATGTAACTTTTCA-AAGTTGT--ACCAAGACGAGGTGGCATCTTTTTCAACAAACG 121224 Query 37685 TACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTA 37744 ||| | || || | | ||||| ||||||||||| ||| | | ||| | Sbjct 121225 ATGGCAAGGCGATGGAAGCCAAGTTACAAACAGCAACTTCTTCTGGAGAAGAATATTCAA 121284 Query 37745 TAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTT 37804 ||| || || | || || | || | ||||| || |||| |||| || | Sbjct 121285 CAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTGGTCTTCT 121344 Query 37805 TATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAA 37864 | ||||||| |||||| || | || | || || || ||| |||| || || | | Sbjct 121345 TGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCTTCCAAGA 121404 Query 37865 TAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtttttttCTTTGTTTCGTATT 37924 | || | ||| || || ||| ||||| | | | | | || | | |||||||| Sbjct 121405 TGGAGTACCACAATTTTTGTGCCTTAACAGTTTGTCTGCCTCTGTTTTCTCTTTCGTATC 121464 Query 37925 CTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATG 37984 | || |||| | || || | || | ||||| || || ||| ||| | Sbjct 121465 TTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCAAGCCAGGAGCCTCGTTAG 121524 Query 37985 GACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCC 38044 || | | || | ||| || | | || ||| || || | ||| || | |||||| | || Sbjct 121525 GAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGGAATCC 121584 Query 38045 ATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGC 38104 | | || | || | |||| | | ||| |||||| || || ||||||||| | | Sbjct 121585 AAAGGGCTGGGAAAAGATCTCTTGCTCTGATTTCTTCTTTACCGTGATTCTTTCTGATGT 121644 Query 38105 TTAGAAAATCGAATATATCAGCGTGCCATGGTTCTA--TATAAATCGACATTGCTCCTGG 38162 | ||||| || || || | |||||| ||||| | || || ||| | || || || Sbjct 121645 CGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAA--GCACCAGG 121702 Query 38163 TCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGG 38222 ||| || | ||| || || | || || | | ||||| || | | | | |||||| Sbjct 121703 TCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACCATAGG 121762 Query 38223 TACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT 38282 | ||||| || || | ||||| |||| | || |||| ||| || || || || Sbjct 121763 GATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGGATGTT 121822 Query 38283 ACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGT 38342 || ||| || || ||||| ||| || || || ||||| || ||| || || Sbjct 121823 GTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTCAAAGT 121882 Query 38343 ATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTG 38402 || | ||||| || || ||| || || || | | | |||||| |||||||| Sbjct 121883 GTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGACATTTG 121942 Query 38403 AGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGA 38462 ||| ||||| |||||||| || | ||||| || | || |||| | ||| || Sbjct 121943 AGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTTTGAGA 122002 Query 38463 CAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATAC 38522 || || || || || || ||| || || || | ||||| ||||| | || || Sbjct 122003 CATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCGTGGATACCAACAGCGAC 122062 Query 38523 CCTCATTAGCATATGTTGTGGTCTTTC 38549 ||||| | || || || |||||||| Sbjct 122063 TCTCATGATCAAGTGCTGAGGTCTTTC 122089 Score = 89.7 bits (98), Expect = 5e-13 Identities = 377/592 (64%), Gaps = 5/592 (1%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || ||||||||||| | || || | || || || Sbjct 294430 AACAACAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAG 294371 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || || || || |||||| |||| || || | ||| || |||| |||||| |||||| Sbjct 294370 AAAGTCAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 294311 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTG 11797 || ||||| || || || || || ||||| || || | |||||| || | | | | | Sbjct 294310 GAGAAGAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCG 294251 Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857 | | | |||||| | ||||| || || ||||| || | |||| || | || Sbjct 294250 TCGTCACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCG 294191 Query 11858 ATAGCGTTAAATAA-ATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAA 11916 || ||||| || || | | || || | ||| | | || || || || ||||| Sbjct 294190 ATGGCGTTGAACAAGAAGTCAGCTTCCT-TTGGATCCTTGATGTAGGTGTCAATCAATAA 294132 Query 11917 ACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGC 11976 || |||| || || || |||||||| ||||| || || ||||||||| || Sbjct 294131 CGAGTAAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGC 294072 Query 11977 CTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATC 12036 || | ||| || || | || |||| | || || || || || |||||||| Sbjct 294071 TTCAGTGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATC 294012 Query 12037 ACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTT 12096 | | ||||| || || | || || ||| || |||||| | || || | Sbjct 294011 AGAGGCAGCAAAGAAGGCCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCT 293952 Query 12097 ATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCAC 12156 | ||| || | ||||| || || | ||||| ||||||| ||| || | Sbjct 293951 GTTCCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTC 293892 Query 12157 TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACG 12208 | || || ||||||| |||||| || || || | | |||||| || ||| Sbjct 293891 AGCTTTCTTGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCACG 293840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524753147520