Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4 304 2e-77
>seq4
Length=1381050
Score = 304 bits (336), Expect = 2e-77
Identities = 817/1236 (66%), Gaps = 20/1236 (2%)
Strand=Plus/Plus
Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531
||||||| ||||||||||||||||| | | || | || | ||||| | |||
Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016
Query 65532 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590
||||| ||| |||| || || ||||| || | ||||| ||||| | | | || ||
Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075
Query 65591 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 65650
||||| |||| | ||||| | |||||||| | || || || ||| || || ||
Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135
Query 65651 TTTATTGAGATTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 65700
| | || | || | |||||| ||| | || | | |||| ||| | |
Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195
Query 65701 AATCAAATCGCTCATCTATT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAA 65756
| | | | ||||| || |||||| ||| ||| || | || |||| ||||||
Sbjct 121196 AGACGAGGTGG-CATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253
Query 65757 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 65816
|| || || || | | | | ||||| | || ||| ||| | || | |||||
Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313
Query 65817 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 65876
||| | || || || | ||| || |||| |||||||| ||||| || || | ||||||
Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373
Query 65877 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 65936
|||||||| ||||| | || | ||| | || | | ||| | | | ||||| |
Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433
Query 65937 ATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 65996
| | || ||| ||||||||||||||| | |||||| ||||||| ||||| ||
Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493
Query 65997 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 66056
|||||| |||| |||||| || | ||| | | | | |||||| |||| |
Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553
Query 66057 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTA 66116
| || || ||||| || ||||||||||||||||| ||| || | |||||| | |||
Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613
Query 66117 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCAC 66176
||| || || || ||||||| | | |||| ||| | | || || | |||||
Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673
Query 66177 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 66236
||||||||||| | ||| | | | ||||| | ||||| || || || || | ||| |
Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733
Query 66237 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 66296
|| ||||| || | || | | ||| || || ||||| ||||| ||||| ||||| ||
Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793
Query 66297 GAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 66356
| || || ||| | ||| || || || | ||| || || || ||
Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853
Query 66357 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 66416
|| ||||| || || || ||| || || || ||||| || || || || || ||
Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913
Query 66417 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 66476
||| | || ||||| |||||||| || | ||| || || || || | |||
Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973
Query 66477 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 66536
|| || |||| || || | ||| ||| | || ||||| ||||||||| | ||
Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033
Query 66537 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 66595
|| || || | || || || || ||||| | ||| | || |||||||||||||||| |
Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092
Query 66596 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 66655
|| ||| ||| ||| |||||||||| ||| |||||||||| || ||||| || |||||
Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152
Query 66656 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
||| ||||| || ||| ||| ||| |||||||
Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188
Score = 176 bits (194), Expect = 6e-39
Identities = 568/868 (65%), Gaps = 29/868 (3%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| |||| || | |||||||| || || || ||||| | || || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 35983
|||||||| |||||||| ||| | || || || || |||| ||| ||||| ||
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596
Query 35984 ATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 36042
| |||||| || ||||| || || | ||| ||||| || ||||| || |
Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536
Query 36043 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 36102
||| | | ||| | ||| | || | ||||||| ||| || || || || || || ||
Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477
Query 36103 AATAGATATTAC--TGTTTC--TTCACTCGGTGGATACAATAAATGTTTAAACATCAAAC 36158
|| | || || || || || || | ||| || |||| ||| |
Sbjct 294476 GATCTTTTCAACAATGGTTGGGTTTGGTCTGTTT-TGCAAG---TGGGAGAACAACAAGC 294421
Query 36159 ATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 36218
| || || ||| ||| | ||| ||||| | || || || |||||||| || || | |
Sbjct 294420 AGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGC 294361
Query 36219 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAA 36278
| ||||| || | ||| || | ||| || || || ||||| || ||||| |||||||
Sbjct 294360 CAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAA 294301
Query 36279 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTA 36335
| ||||| || || |||||||||| | ||| || || | | || | |||| |
Sbjct 294300 TACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAA 294241
Query 36336 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 36395
|||| | |||||| ||||||||||| || | || || || | || || || || |
Sbjct 294240 TCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGA 294181
Query 36396 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATT 36454
| | ||| ||| || ||| || | || || |||||||| | || | || ||
Sbjct 294180 ACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAAGTT 294122
Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514
|| || || |||||||| || ||||| || |||||||||||| | || || || | |
Sbjct 294121 TCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACC 294062
Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574
|| ||||| | | || ||| | || ||||| || || || || ||| ||| |||
Sbjct 294061 TGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCA 294002
Query 36575 AAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCA 36630
|| || ||||| | || | || || || ||||||| || | | |||||
Sbjct 294001 AAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCA 293946
Query 36631 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 36690
|| | | | |||||| | || | ||||| | ||||| || || || || || ||
Sbjct 293945 GTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTT 293886
Query 36691 TTTATACATATTCCAGATGTCATGATAT 36718
|| ||||| | |||||| || || |||
Sbjct 293885 CTTGTACATTTGCCAGATCTCGTGGTAT 293858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172734182720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |