Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 304 2e-77 >seq4 Length=1381050 Score = 304 bits (336), Expect = 2e-77 Identities = 817/1236 (66%), Gaps = 20/1236 (2%) Strand=Plus/Plus Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 ||||||| ||||||||||||||||| | | || | || | ||||| | ||| Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016 Query 65532 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590 ||||| ||| |||| || || ||||| || | ||||| ||||| | | | || || Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075 Query 65591 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 65650 ||||| |||| | ||||| | |||||||| | || || || ||| || || || Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135 Query 65651 TTTATTGAGATTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 65700 | | || | || | |||||| ||| | || | | |||| ||| | | Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195 Query 65701 AATCAAATCGCTCATCTATT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAA 65756 | | | | ||||| || |||||| ||| ||| || | || |||| |||||| Sbjct 121196 AGACGAGGTGG-CATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253 Query 65757 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 65816 || || || || | | | | ||||| | || ||| ||| | || | ||||| Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313 Query 65817 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 65876 ||| | || || || | ||| || |||| |||||||| ||||| || || | |||||| Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373 Query 65877 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 65936 |||||||| ||||| | || | ||| | || | | ||| | | | ||||| | Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433 Query 65937 ATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 65996 | | || ||| ||||||||||||||| | |||||| ||||||| ||||| || Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493 Query 65997 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 66056 |||||| |||| |||||| || | ||| | | | | |||||| |||| | Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553 Query 66057 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTA 66116 | || || ||||| || ||||||||||||||||| ||| || | |||||| | ||| Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613 Query 66117 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCAC 66176 ||| || || || ||||||| | | |||| ||| | | || || | ||||| Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673 Query 66177 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 66236 ||||||||||| | ||| | | | ||||| | ||||| || || || || | ||| | Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733 Query 66237 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 66296 || ||||| || | || | | ||| || || ||||| ||||| ||||| ||||| || Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793 Query 66297 GAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 66356 | || || ||| | ||| || || || | ||| || || || || Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853 Query 66357 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 66416 || ||||| || || || ||| || || || ||||| || || || || || || Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913 Query 66417 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 66476 ||| | || ||||| |||||||| || | ||| || || || || | ||| Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973 Query 66477 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 66536 || || |||| || || | ||| ||| | || ||||| ||||||||| | || Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033 Query 66537 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 66595 || || || | || || || || ||||| | ||| | || |||||||||||||||| | Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092 Query 66596 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 66655 || ||| ||| ||| |||||||||| ||| |||||||||| || ||||| || ||||| Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152 Query 66656 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691 ||| ||||| || ||| ||| ||| ||||||| Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188 Score = 176 bits (194), Expect = 6e-39 Identities = 568/868 (65%), Gaps = 29/868 (3%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| |||| || | |||||||| || || || ||||| | || || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 35983 |||||||| |||||||| ||| | || || || || |||| ||| ||||| || Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596 Query 35984 ATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 36042 | |||||| || ||||| || || | ||| ||||| || ||||| || | Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536 Query 36043 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 36102 ||| | | ||| | ||| | || | ||||||| ||| || || || || || || || Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477 Query 36103 AATAGATATTAC--TGTTTC--TTCACTCGGTGGATACAATAAATGTTTAAACATCAAAC 36158 || | || || || || || || | ||| || |||| ||| | Sbjct 294476 GATCTTTTCAACAATGGTTGGGTTTGGTCTGTTT-TGCAAG---TGGGAGAACAACAAGC 294421 Query 36159 ATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 36218 | || || ||| ||| | ||| ||||| | || || || |||||||| || || | | Sbjct 294420 AGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGC 294361 Query 36219 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAA 36278 | ||||| || | ||| || | ||| || || || ||||| || ||||| ||||||| Sbjct 294360 CAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAA 294301 Query 36279 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTA 36335 | ||||| || || |||||||||| | ||| || || | | || | |||| | Sbjct 294300 TACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAA 294241 Query 36336 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 36395 |||| | |||||| ||||||||||| || | || || || | || || || || | Sbjct 294240 TCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGA 294181 Query 36396 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATT 36454 | | ||| ||| || ||| || | || || |||||||| | || | || || Sbjct 294180 ACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAAGTT 294122 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || || || |||||||| || ||||| || |||||||||||| | || || || | | Sbjct 294121 TCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACC 294062 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || ||||| | | || ||| | || ||||| || || || || ||| ||| ||| Sbjct 294061 TGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCA 294002 Query 36575 AAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCA 36630 || || ||||| | || | || || || ||||||| || | | ||||| Sbjct 294001 AAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCA 293946 Query 36631 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 36690 || | | | |||||| | || | ||||| | ||||| || || || || || || Sbjct 293945 GTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTT 293886 Query 36691 TTTATACATATTCCAGATGTCATGATAT 36718 || ||||| | |||||| || || ||| Sbjct 293885 CTTGTACATTTGCCAGATCTCGTGGTAT 293858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172734182720