Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 4e-19
seq6 100 2e-16
>seq1
Length=2570408
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| |||||||| || | ||| ||||||||| | ||||| || |||
Sbjct 1137214 CCACCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1137273
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||| || |||||||| ||||||| || || || | ||
Sbjct 1137274 AAGGTTCTACCATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 1137333
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||||||| || |||| ||||| || | | |||||| | ||||||
Sbjct 1137334 ATACCTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACT 1137393
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || || || || ||||||| ||| || || ||||||||||| ||
Sbjct 1137394 TCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 1137443
>seq6
Length=1120317
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| ||||||
Sbjct 961702 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 961643
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | |||| |||||||| || |||||||| ||||||| || || || | ||
Sbjct 961642 AAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGA 961583
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||| || || | | |||||| || |||||
Sbjct 961582 ATACCTTCCTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACT 961523
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || || || || ||||| | || || || ||||||||||||||
Sbjct 961522 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATTTT 961473
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| || ||
Sbjct 962158 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 962099
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| ||||||||||| |||||||| ||||||| || || || | ||
Sbjct 962098 AGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGG 962039
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| |||||| || ||| |||||| || || ||
Sbjct 962038 ATACCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACT 961979
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || || || || ||||| | || || || || ||||||||
Sbjct 961978 TCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369562816464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |