Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 286 5e-72 >seq4 Length=1381050 Score = 286 bits (316), Expect = 5e-72 Identities = 766/1166 (66%), Gaps = 5/1166 (0%) Strand=Plus/Plus Query 71675 CATCTATTACAA-ACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731 ||||| || ||| | ||| | |||||| | || |||| |||||||| || || || | Sbjct 121207 CATCTTTTTCAACAAACGATGGCAAGGCGATGGAAGCCAAGTTACAAACAGCAACTTCTT 121266 Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791 | | | ||||| | ||||||| ||| | || | |||||||| | || || | Sbjct 121267 CTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGT 121326 Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851 | | ||| || |||| |||||||| ||||| || || | || || |||||||| |||| Sbjct 121327 TCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTT 121386 Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATC 71911 | | || | ||| | || | | ||| | | | ||||| | | | || || Sbjct 121387 CGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACAGTTTGTCTGCCTC 121446 Query 71912 TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971 | ||||||||||||||| | || ||| ||||||| ||||| || || ||| | | Sbjct 121447 TGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCA 121506 Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 | |||||| || || ||| | | | | |||||| || | | | || || |||| Sbjct 121507 AGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCA 121566 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091 | || ||||||||||||||||| ||| || |||||||| | ||| || || || | Sbjct 121567 TGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTGATTTCTTCTTTAC 121626 Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151 | ||||||| | | |||| ||| | | || || || ||||| ||||||||||| | Sbjct 121627 CGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACA 121686 Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 ||| | | | || || | ||||| || || || || | ||| | || ||||| || Sbjct 121687 AGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGA 121746 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | || | | ||| || || ||||| ||||| | ||| ||||| || | || || | Sbjct 121747 ACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCAC 121806 Query 72272 CACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 || | ||| || ||| || | ||| || || || || || ||||| || | Sbjct 121807 CAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAG 121866 Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391 | || ||| || || || ||||| || || || || || ||||| | || | Sbjct 121867 CACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGA 121926 Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 |||| |||||||| || | ||| || || || || | ||||| || |||| | Sbjct 121927 AACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAG 121986 Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGA 72510 | || | ||| ||||| || ||||| ||||||||| | ||| || || || | Sbjct 121987 TGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCG- 122045 Query 72511 TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT 72570 || || || || ||||| | ||| | || ||||||||||||||| ||| ||| || Sbjct 122046 TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGCGACTTTGCCGTTG 122105 Query 72571 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 72630 ||| |||||||||| ||| |||||||||| || ||||| || |||||||| ||||| Sbjct 122106 ATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAGTCA 122165 Query 72631 CGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 72690 || ||| ||| ||| |||| || | || || | ||| | | || || |||| Sbjct 122166 CGGTCGAAAACAATGGCCGAGTTCAATTCGTCAGCGTGTTTTTGGATGATGTCGTAGGTG 122225 Query 72691 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 72750 | ||||| || || |||||| || | || || ||||| || | | | || || Sbjct 122226 TCTTTAGAAATCATAGGCGAATGTAAGTCAGTCTTTGGGTTAACGTATTCGTACAACTCT 122285 Query 72751 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 72810 | | | | || | || | |||| || |||| || || ||||| | |||| Sbjct 122286 TTCGAGATCTGGGAGAACTGCTTGGTGGTTTGTTTATGTAAGTTGGAAACGGCGAGTCTG 122345 Query 72811 GCGGCTAGAATGGCATAATCTGGATG 72836 ||||| | ||| || || || ||||| Sbjct 122346 GCGGCCAAAATAGCGTAGTCGGGATG 122371 Score = 194 bits (214), Expect = 2e-44 Identities = 572/873 (66%), Gaps = 39/873 (4%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| |||| || | |||||||| || || ||||| || |||| || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 41890 |||||||| || || || ||||| || || || || |||| ||| ||||| || Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596 Query 41891 ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 41949 | |||||| || |||| ||| || | ||| ||||| || ||||| || | Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536 Query 41950 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 42009 ||| | | ||| | ||| | || | ||||||| ||| || || || || || || || Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477 Query 42010 AATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT---------AAATGTTTAAACAT 42060 |||||| ||| || | | ||| | | || || |||| Sbjct 294476 ----GATCTT-----TTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAA 294426 Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 ||| || || || ||| ||||| ||| || || | || || || |||||||| || || Sbjct 294425 CAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGT 294366 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 | || ||||| || | ||| || | ||| || ||||| ||||| || ||||| || Sbjct 294365 CAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAA 294306 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTC 42237 ||| || ||||| || || |||||||||| | ||| || || | | || | ||| Sbjct 294305 GAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTC 294246 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 | ||||| | |||||| ||||||||||| || | || || || | || ||||| Sbjct 294245 ACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGC 294186 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA-T 42356 || || | ||| ||| || ||| || | || || || ||||| | || | | Sbjct 294185 GTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGT 294127 Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416 | |||| || || |||||||| || || || || |||||||||||| |||| || | Sbjct 294126 AAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAG 294067 Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476 | ||||| ||||| | | || ||| | || |||||||| || || || ||| || Sbjct 294066 TGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGG 294007 Query 42477 CTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCCGGTGTTAATTTA 42532 | ||||| || ||||| | || | || || || |||||| || || | Sbjct 294006 CAGCAAAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTG 293951 Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592 ||||| || | | | |||||| | || | ||||| | ||||| || || ||||| Sbjct 293950 TTCCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCA 293891 Query 42593 GCCTTTTTATACATATTCCAGATATCATGATAT 42625 || || || ||||| | |||||| || || ||| Sbjct 293890 GCTTTCTTGTACATTTGCCAGATCTCGTGGTAT 293858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080