Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 286 5e-72
>seq4
Length=1381050
Score = 286 bits (316), Expect = 5e-72
Identities = 766/1166 (66%), Gaps = 5/1166 (0%)
Strand=Plus/Plus
Query 71675 CATCTATTACAA-ACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731
||||| || ||| | ||| | |||||| | || |||| |||||||| || || || |
Sbjct 121207 CATCTTTTTCAACAAACGATGGCAAGGCGATGGAAGCCAAGTTACAAACAGCAACTTCTT 121266
Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791
| | | ||||| | ||||||| ||| | || | |||||||| | || || |
Sbjct 121267 CTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGT 121326
Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851
| | ||| || |||| |||||||| ||||| || || | || || |||||||| ||||
Sbjct 121327 TCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTT 121386
Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATC 71911
| | || | ||| | || | | ||| | | | ||||| | | | || ||
Sbjct 121387 CGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACAGTTTGTCTGCCTC 121446
Query 71912 TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971
| ||||||||||||||| | || ||| ||||||| ||||| || || ||| | |
Sbjct 121447 TGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCA 121506
Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031
| |||||| || || ||| | | | | |||||| || | | | || || ||||
Sbjct 121507 AGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCA 121566
Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091
| || ||||||||||||||||| ||| || |||||||| | ||| || || || |
Sbjct 121567 TGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTGATTTCTTCTTTAC 121626
Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151
| ||||||| | | |||| ||| | | || || || ||||| ||||||||||| |
Sbjct 121627 CGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACA 121686
Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211
||| | | | || || | ||||| || || || || | ||| | || ||||| ||
Sbjct 121687 AGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGA 121746
Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271
| || | | ||| || || ||||| ||||| | ||| ||||| || | || || |
Sbjct 121747 ACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCAC 121806
Query 72272 CACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331
|| | ||| || ||| || | ||| || || || || || ||||| || |
Sbjct 121807 CAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAG 121866
Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391
| || ||| || || || ||||| || || || || || ||||| | || |
Sbjct 121867 CACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGA 121926
Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451
|||| |||||||| || | ||| || || || || | ||||| || |||| |
Sbjct 121927 AACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAG 121986
Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGA 72510
| || | ||| ||||| || ||||| ||||||||| | ||| || || || |
Sbjct 121987 TGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCG- 122045
Query 72511 TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT 72570
|| || || || ||||| | ||| | || ||||||||||||||| ||| ||| ||
Sbjct 122046 TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGCGACTTTGCCGTTG 122105
Query 72571 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 72630
||| |||||||||| ||| |||||||||| || ||||| || |||||||| |||||
Sbjct 122106 ATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAGTCA 122165
Query 72631 CGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 72690
|| ||| ||| ||| |||| || | || || | ||| | | || || ||||
Sbjct 122166 CGGTCGAAAACAATGGCCGAGTTCAATTCGTCAGCGTGTTTTTGGATGATGTCGTAGGTG 122225
Query 72691 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 72750
| ||||| || || |||||| || | || || ||||| || | | | || ||
Sbjct 122226 TCTTTAGAAATCATAGGCGAATGTAAGTCAGTCTTTGGGTTAACGTATTCGTACAACTCT 122285
Query 72751 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 72810
| | | | || | || | |||| || |||| || || ||||| | ||||
Sbjct 122286 TTCGAGATCTGGGAGAACTGCTTGGTGGTTTGTTTATGTAAGTTGGAAACGGCGAGTCTG 122345
Query 72811 GCGGCTAGAATGGCATAATCTGGATG 72836
||||| | ||| || || || |||||
Sbjct 122346 GCGGCCAAAATAGCGTAGTCGGGATG 122371
Score = 194 bits (214), Expect = 2e-44
Identities = 572/873 (66%), Gaps = 39/873 (4%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| |||| || | |||||||| || || ||||| || |||| || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 41890
|||||||| || || || ||||| || || || || |||| ||| ||||| ||
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596
Query 41891 ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 41949
| |||||| || |||| ||| || | ||| ||||| || ||||| || |
Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536
Query 41950 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 42009
||| | | ||| | ||| | || | ||||||| ||| || || || || || || ||
Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477
Query 42010 AATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT---------AAATGTTTAAACAT 42060
|||||| ||| || | | ||| | | || || ||||
Sbjct 294476 ----GATCTT-----TTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAA 294426
Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120
||| || || || ||| ||||| ||| || || | || || || |||||||| || ||
Sbjct 294425 CAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGT 294366
Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180
| || ||||| || | ||| || | ||| || ||||| ||||| || ||||| ||
Sbjct 294365 CAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAA 294306
Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTC 42237
||| || ||||| || || |||||||||| | ||| || || | | || | |||
Sbjct 294305 GAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTC 294246
Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297
| ||||| | |||||| ||||||||||| || | || || || | || |||||
Sbjct 294245 ACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGC 294186
Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA-T 42356
|| || | ||| ||| || ||| || | || || || ||||| | || | |
Sbjct 294185 GTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGT 294127
Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416
| |||| || || |||||||| || || || || |||||||||||| |||| || |
Sbjct 294126 AAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAG 294067
Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476
| ||||| ||||| | | || ||| | || |||||||| || || || ||| ||
Sbjct 294066 TGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGG 294007
Query 42477 CTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCCGGTGTTAATTTA 42532
| ||||| || ||||| | || | || || || |||||| || || |
Sbjct 294006 CAGCAAAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTG 293951
Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592
||||| || | | | |||||| | || | ||||| | ||||| || || |||||
Sbjct 293950 TTCCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCA 293891
Query 42593 GCCTTTTTATACATATTCCAGATATCATGATAT 42625
|| || || ||||| | |||||| || || |||
Sbjct 293890 GCTTTCTTGTACATTTGCCAGATCTCGTGGTAT 293858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139132886080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |