Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 156 6e-33
>seq4
Length=1381050
Score = 156 bits (172), Expect = 6e-33
Identities = 575/892 (64%), Gaps = 34/892 (4%)
Strand=Plus/Plus
Query 125005 TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCG 125064
|||| || || || || ||| |||||||||| || ||| | || || || ||||| | ||
Sbjct 293854 TCAGATACCACGAGATCTGGCAAATGTACAAGAAAGCTGAAGCTTCTTTCTGGACCGCCG 293913
Query 125065 AAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGC 125124
||||| |||| || || ||| | || ||| | | | ||||| || | ||
Sbjct 293914 AAGAGCTCGACTTGAGTAAAGACACCCAAGACTGGAACA---GCTTGACCGACAACGAAA 293970
Query 125125 GAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACA 125184
|| || || || || |||||||||||||| | ||| ||||| ||||||||||| |
Sbjct 293971 GATTCTTCATTTCTAGAATCTTGGCCTTCTTTGCTGCCTCTGATGGTATCGTCAACGAAA 294030
Query 125185 ATCTGTTGACACGATTCTC---TCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACG 125241
| || | | ||||| | ||| | | || | || | || || ||||
Sbjct 294031 ACTTGGTCGAAAACTTCTCCTCTGAAGTGCAGGTCACT---GAAGCCAAATGTTTCTACG 294087
Query 125242 GATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGT 125301
| |||||||||||||| || ||| | ||||| |||| ||||| | ||||||||| |
Sbjct 294088 GTTTCCAAATCATGATGGAAAACATCCACTCCGAAACTTACTCGTTATTGATTGACACCT 294147
Query 125302 ACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACACGGTGCCGTC 125359
|||| |||| ||| | || | || | | || ||||| ||||||| | || |
Sbjct 294148 ACATCAAGGATC--CAAAGGAAGCTGACTTCTTGTTCAACGCCATCGACAACATCCCATG 294205
Query 125360 TATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGC 125419
|| || ||||| | |||| | | ||||| ||||||| | ||| || ||
Sbjct 294206 CATCAAGAAGAAGGCCGACTGGGCTTTGAGATGGATTAGTGACGACGACGCTTTGTTCGG 294265
Query 125420 CGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGC 125479
|| ||| |||| || || |||||||| || || || ||||| || ||| ||||| |
Sbjct 294266 TGAAAGATTGGTTGCCTTTGCCGCCGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTC 294325
Query 125480 CATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTAT 125539
||||| ||| | |||||| | || ||||| || |||| | |||||||| ||
Sbjct 294326 TATCTTCTGGTTGAAGAAGAGAGGTAAGATGCCTGGCTTGACTTTCTCCAACGAGTTGAT 294385
Query 125540 ATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCG 125599
| ||| ||||| || | ||| ||||||||| | || |||| | | | |||
Sbjct 294386 CTGTCGTGACGAAGGTTTGCACACCGACTTTGCC-TGCT--TGTTGTTCTCCCACTTGCA 294442
Query 125600 TCCCGAGTGCAGATCCAGC----GATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655
| || || | ||| | | ||||||| ||| | ||||| || ||
Sbjct 294443 AAAC-AGACCAAACCCAACCATTGTTGAAAAGATCA---------TTACCGAAGCTGTTT 294492
Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715
|| ||| |||| || | ||||| | | || |||| || | || ||||||
Sbjct 294493 CCATCGAAAAAGAATTCTTCACCGATGCTTTGCCATGCAGCTTGTTGGGTATGAACAAGG 294552
Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC 125775
| | |||||| | ||| | ||||| || || || | | || | ||| | |
Sbjct 294553 ACTTGATGTGCCAATACGTTGAGTTCGTCGCCGACAGATTGTTGGTTGCCTTGGGTAACG 294612
Query 125776 GCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTA 125835
||| | ||||||| || || || || || |||||| | ||| || | | ||||
Sbjct 294613 AAAAGTTCTACAACGTCACCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTA 294672
Query 125836 AGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885
|||||||||| ||||| |||| ||||| || ||| ||| || |||||||
Sbjct 294673 AGACCAACTTCTTCGAAAAGAGAGTCAGTGATTACCAAAAGGC--CGGTGTC 294722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059125894080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |