Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 156 6e-33 >seq4 Length=1381050 Score = 156 bits (172), Expect = 6e-33 Identities = 575/892 (64%), Gaps = 34/892 (4%) Strand=Plus/Plus Query 125005 TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCG 125064 |||| || || || || ||| |||||||||| || ||| | || || || ||||| | || Sbjct 293854 TCAGATACCACGAGATCTGGCAAATGTACAAGAAAGCTGAAGCTTCTTTCTGGACCGCCG 293913 Query 125065 AAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGC 125124 ||||| |||| || || ||| | || ||| | | | ||||| || | || Sbjct 293914 AAGAGCTCGACTTGAGTAAAGACACCCAAGACTGGAACA---GCTTGACCGACAACGAAA 293970 Query 125125 GAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACA 125184 || || || || || |||||||||||||| | ||| ||||| ||||||||||| | Sbjct 293971 GATTCTTCATTTCTAGAATCTTGGCCTTCTTTGCTGCCTCTGATGGTATCGTCAACGAAA 294030 Query 125185 ATCTGTTGACACGATTCTC---TCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACG 125241 | || | | ||||| | ||| | | || | || | || || |||| Sbjct 294031 ACTTGGTCGAAAACTTCTCCTCTGAAGTGCAGGTCACT---GAAGCCAAATGTTTCTACG 294087 Query 125242 GATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGT 125301 | |||||||||||||| || ||| | ||||| |||| ||||| | ||||||||| | Sbjct 294088 GTTTCCAAATCATGATGGAAAACATCCACTCCGAAACTTACTCGTTATTGATTGACACCT 294147 Query 125302 ACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACACGGTGCCGTC 125359 |||| |||| ||| | || | || | | || ||||| ||||||| | || | Sbjct 294148 ACATCAAGGATC--CAAAGGAAGCTGACTTCTTGTTCAACGCCATCGACAACATCCCATG 294205 Query 125360 TATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGC 125419 || || ||||| | |||| | | ||||| ||||||| | ||| || || Sbjct 294206 CATCAAGAAGAAGGCCGACTGGGCTTTGAGATGGATTAGTGACGACGACGCTTTGTTCGG 294265 Query 125420 CGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGC 125479 || ||| |||| || || |||||||| || || || ||||| || ||| ||||| | Sbjct 294266 TGAAAGATTGGTTGCCTTTGCCGCCGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTC 294325 Query 125480 CATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTAT 125539 ||||| ||| | |||||| | || ||||| || |||| | |||||||| || Sbjct 294326 TATCTTCTGGTTGAAGAAGAGAGGTAAGATGCCTGGCTTGACTTTCTCCAACGAGTTGAT 294385 Query 125540 ATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCG 125599 | ||| ||||| || | ||| ||||||||| | || |||| | | | ||| Sbjct 294386 CTGTCGTGACGAAGGTTTGCACACCGACTTTGCC-TGCT--TGTTGTTCTCCCACTTGCA 294442 Query 125600 TCCCGAGTGCAGATCCAGC----GATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655 | || || | ||| | | ||||||| ||| | ||||| || || Sbjct 294443 AAAC-AGACCAAACCCAACCATTGTTGAAAAGATCA---------TTACCGAAGCTGTTT 294492 Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715 || ||| |||| || | ||||| | | || |||| || | || |||||| Sbjct 294493 CCATCGAAAAAGAATTCTTCACCGATGCTTTGCCATGCAGCTTGTTGGGTATGAACAAGG 294552 Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC 125775 | | |||||| | ||| | ||||| || || || | | || | ||| | | Sbjct 294553 ACTTGATGTGCCAATACGTTGAGTTCGTCGCCGACAGATTGTTGGTTGCCTTGGGTAACG 294612 Query 125776 GCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTA 125835 ||| | ||||||| || || || || || |||||| | ||| || | | |||| Sbjct 294613 AAAAGTTCTACAACGTCACCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTA 294672 Query 125836 AGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 |||||||||| ||||| |||| ||||| || ||| ||| || ||||||| Sbjct 294673 AGACCAACTTCTTCGAAAAGAGAGTCAGTGATTACCAAAAGGC--CGGTGTC 294722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059125894080