Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq4 172 5e-38
>seq4
Length=1381050
Score = 172 bits (190), Expect = 5e-38
Identities = 544/838 (65%), Gaps = 4/838 (0%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || || ||||| ||||| || ||||| || || || | || || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979
||||| || ||||| || || | ||| | |||| || || | | |||
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTACCCAAGGCAACCAAC 294593
Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039
|||||||| || || ||||| | ||| || ||| || || |||||| || | ||
Sbjct 294592 AATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACAAG 294533
Query 13040 TTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATG 13099
| |||| ||| || || || || | |||||| || ||| |||||| ||| ||
Sbjct 294532 CTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATGATC 294473
Query 13100 TCTCTTATTACGTTCTCTAATGGAG-GATTTGATAGATGCTTAAACATCATACATGCAAA 13158
| | | | | | ||| | |||| || || |||| || || |||||
Sbjct 294472 TTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAG-TGGGAGAACAACAAGCAGGCAAA 294414
Query 13159 ATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT 13218
|| |||||| ||||| || | || || | |||||| || || || | || |||||
Sbjct 294413 GTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAGGCAT 294354
Query 13219 AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTC 13278
|||| || || | ||| || |||| |||||| ||||| || || || || |||||
Sbjct 294353 CTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATACCTTC 294294
Query 13279 AACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTA-TCCACT 13337
|| || ||||| || | ||| |||||||| || | | | || ||| ||||
Sbjct 294293 GACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCG-TCACTAATCCATC 294235
Query 13338 TTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAAT 13397
| ||||||| || || | || | ||| || || || || ||||| || ||
Sbjct 294234 TCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAACAAGA 294175
Query 13398 AAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAAT 13457
| | |||||| || || || || || |||||||| || |||| || |
Sbjct 294174 AGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATAACGAGTAAGTTTCGGAGT 294115
Query 13458 GAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTT 13517
| || ||||||||| ||||||||||| || |||||| | || || | ||||| ||||
Sbjct 294114 GGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACCTGCACTT 294055
Query 13518 CGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaG 13577
| ||| | || |||| | ||||||||||| || || || ||| |||||||| || |
Sbjct 294054 CAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCAAAGAAGG 293995
Query 13578 CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGGAAAAT 13637
| | || ||| || | ||||||| || | ||| | ||| ||| | |
Sbjct 293994 CCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCAGTCTTGGGTGT 293935
Query 13638 CTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACAT 13695
|||| || || | ||| || ||||||| |||||||| |||| ||||| |||||
Sbjct 293934 CTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCTTGTACAT 293877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982357979216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |