Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 2e-35
seq6 125 2e-23
>seq4
Length=1381050
Score = 165 bits (182), Expect = 2e-35
Identities = 381/563 (68%), Gaps = 21/563 (4%)
Strand=Plus/Plus
Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801
|||||||| | || | |||||||| ||||| | ||||| | || || | | |||
Sbjct 293877 ATGTACAAGAAAGCTGAAGCTTCTTTCTGGACCGCCGAAGAGCTCGACTTGAGTAAAGAC 293936
Query 268802 TTAATAGATTGGAAAAATTTAAAACCAGAA-GAAAGAAGATTTATATCTTATATTCTTG- 268859
||| ||||| | || | | | || |||||| || || ||| | | |||||
Sbjct 293937 ACCCAAGACTGGAACAGCTTGAC-CGACAACGAAAGATTCTTCATTTCT-AGAATCTTGG 293994
Query 268860 CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAG 268919
| || ||||| | |||||||||||| |||||||| | || || || |||| |
Sbjct 293995 CCTTCTTTGCTGCCTCTGATGGTATCGTCAACGAAAACTTGGTCGAAAACTTCTCCTCTG 294054
Query 268920 AGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTC 268979
| || ||| | ||||||||| |||||| ||||| ||||| || || ||||| || |
Sbjct 294055 AAGTGCAGGTCACTGAAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATCC 294114
Query 268980 ATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA 269039
| || || | ||| |||| || || || || || | ||| | ||| |||
Sbjct 294115 ACTCCGAAACTTACTCGTTATTGATTGACACCTACATCAAGGAT-----CCAAAGGAAGC 294169
Query 269040 -GACTATTTTCTTCTATG------AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGG 269092
|||| | || ||| | | | ||| || || | | || || | || |||
Sbjct 294170 TGACT-TCTTGTTCAACGCCATCGACAAC-ATCCCATGCATCAAGAAGAAGGCCGACTGG 294227
Query 269093 GCTCTGAAATGGATAAACGATAGCG-CGCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCC 269149
||| ||| |||||| | || || ||| || ||| ||||| || ||||| ||||||
Sbjct 294228 GCTTTGAGATGGATTAGTGACGACGACGCTTTGTTCGGTGAAAGATTGGTTGCCTTTGCC 294287
Query 269150 GCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGA 269209
|| || |||||||| ||||| || || || ||||| ||||||| ||||||||||| |||
Sbjct 294288 GCCGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCTATCTTCTGGTTGAAGAAGAGA 294347
Query 269210 GGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACAC 269269
|| ||||| || || |||||||| ||||| ||||| | | ||||||||||| |||
Sbjct 294348 GGTAAGATGCCTGGCTTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCAC 294407
Query 269270 TGCGACTTCGCTTGTTTATTATT 269292
|||||| || || || || ||
Sbjct 294408 ACCGACTTTGCCTGCTTGTTGTT 294430
>seq6
Length=1120317
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| ||||||||||||||||| | |||||| ||
Sbjct 962128 GTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGTTTACCG 962069
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || || || || || || || ||||| || || || ||||| | |||
Sbjct 962068 GCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTGGATTTG 962009
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| || ||| || |||| || || |||||||| || | ||
Sbjct 962008 ACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAGGTC 961949
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 961948 TTAACGAAGATTTGCAT 961932
Score = 104 bits (114), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || ||||| || | ||||| |||||||| | ||| || ||
Sbjct 962356 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAATTGCTTACCG 962297
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| |||| || || || || || || || ||||| || || ||||| || | ||
Sbjct 962296 GCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATTTTAGACTTG 962237
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| || ||| || || | ||||| ||||||||||| | ||
Sbjct 962236 ACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTACCAGTCAAGGTC 962177
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 962176 TTAACGAAGATTTGCAT 962160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398281981664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |