Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 120 5e-23 seq3 107 3e-19 >seq2 Length=2224902 Score = 120 bits (132), Expect = 5e-23 Identities = 191/269 (71%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||||| | |||| ||||||||||| || |||||||||||||| Sbjct 375238 GCTAAGCGTCACAGAAAGATCT-TGAGAGACAACATCCAAGGTATTACCAAGCCAGCTAT 375296 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||||| ||| |||| ||||| | Sbjct 375297 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCTGCTTTGATCTACGAAGAAGT 375356 Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | ||| ||||| ||| ||| | | | ||||||| || ||| | || || | Sbjct 375357 CAGAGGTGTCTTGAA-ATCTTTCTTGGAAAACGTTATCAGAGACGCTGTTACTTACACTG 375415 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || | ||||| || ||||| | ||| |||| || || ||||| | |||| Sbjct 375416 AACACGCCAAGAGAAAGACCGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAG 375475 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | || ||||| || ||||| Sbjct 375476 GTAGAACCTTGTACGGTTTCGGTGGTTAA 375504 >seq3 Length=1810771 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||||| | |||| ||||| ||||| || |||||||||||||| Sbjct 1448889 GCTAAGCGTCACAGAAAGATCT-TAAGAGACAACATTCAAGGTATTACCAAGCCAGCTAT 1448947 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | |||| ||| | || ||||| | Sbjct 1448948 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCTGCTTTGATTTACGAAGAAGT 1449007 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | | ||||||| |||||| | || || || Sbjct 1449008 CAGAGGTGTCTTGAAATCCTTCTTGGAAAACGTTATCAGAGATGCTGTTACTTACACTGA 1449067 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || | ||||| || ||||| | ||| |||| || || ||||| | ||||| Sbjct 1449068 GCATGCCAAGAGAAAGACCGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAGG 1449127 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||| || ||||| Sbjct 1449128 TAGAACTTTGTACGGTTTCGGTGGTTAA 1449155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075192685544