Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 5e-23
seq3 107 3e-19
>seq2
Length=2224902
Score = 120 bits (132), Expect = 5e-23
Identities = 191/269 (71%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||||| | |||| ||||||||||| || ||||||||||||||
Sbjct 375238 GCTAAGCGTCACAGAAAGATCT-TGAGAGACAACATCCAAGGTATTACCAAGCCAGCTAT 375296
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||||| ||| |||| ||||| |
Sbjct 375297 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCTGCTTTGATCTACGAAGAAGT 375356
Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | ||| ||||| ||| ||| | | | ||||||| || ||| | || || |
Sbjct 375357 CAGAGGTGTCTTGAA-ATCTTTCTTGGAAAACGTTATCAGAGACGCTGTTACTTACACTG 375415
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || | ||||| || ||||| | ||| |||| || || ||||| | ||||
Sbjct 375416 AACACGCCAAGAGAAAGACCGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAG 375475
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | | || ||||| || |||||
Sbjct 375476 GTAGAACCTTGTACGGTTTCGGTGGTTAA 375504
>seq3
Length=1810771
Score = 107 bits (118), Expect = 3e-19
Identities = 186/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||||| | |||| ||||| ||||| || ||||||||||||||
Sbjct 1448889 GCTAAGCGTCACAGAAAGATCT-TAAGAGACAACATTCAAGGTATTACCAAGCCAGCTAT 1448947
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| ||||||||| | |||| ||| | || ||||| |
Sbjct 1448948 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCTGCTTTGATTTACGAAGAAGT 1449007
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | | ||||||| |||||| | || || ||
Sbjct 1449008 CAGAGGTGTCTTGAAATCCTTCTTGGAAAACGTTATCAGAGATGCTGTTACTTACACTGA 1449067
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | ||||| || ||||| | ||| |||| || || ||||| | |||||
Sbjct 1449068 GCATGCCAAGAGAAAGACCGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAGG 1449127
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | || ||||| || |||||
Sbjct 1449128 TAGAACTTTGTACGGTTTCGGTGGTTAA 1449155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075192685544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |