Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4 120 3e-22 >seq4 Length=1381050 Score = 120 bits (132), Expect = 3e-22 Identities = 300/452 (66%), Gaps = 4/452 (1%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| |||||||| ||||| |||||||| || || ||||| || |||| || || | Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 21245 TCCATAAAATCAAATGGATTT-TCAGATT-TAAATATTTTATTACAACCCAGTTCTGATA 21302 ||||| || || ||||| || | | || || | |||| | ||||| | | Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTT--ACCCAAGGCAACCA 294595 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 | ||||| || || || || || | ||||| ||||| || || |||||||| | || Sbjct 294594 ACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAACA 294535 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422 | | || | ||| | || || || |||||| || || || ||||| ||| | Sbjct 294534 AGCTGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAATGA 294475 Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 | ||| | | | || | || | || || |||| ||| || |||| Sbjct 294474 TCTTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAGGCAA 294415 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 | || ||||||||||| || | || || || || || || || || || || |||| Sbjct 294414 AGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAGGCA 294355 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 | |||||||| || ||||| || || || ||||| | || || |||||||| || | Sbjct 294354 TCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATACCTT 294295 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCG 21634 | ||||| ||||| ||||| |||| ||||||| Sbjct 294294 CGACGGCGGCAAAGGCAACCAATCTTTCACCG 294263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900746809920