Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4 324 2e-83
>seq4
Length=1381050
Score = 324 bits (358), Expect = 2e-83
Identities = 962/1468 (66%), Gaps = 22/1468 (1%)
Strand=Plus/Plus
Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687
||||||| ||||||||||||||||| | | || | || | ||||| | |||
Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016
Query 62688 AATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746
||||| ||| |||| || || ||||| || | ||||| ||||| | | | || ||
Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075
Query 62747 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62806
||||| |||| | ||||| | |||||||| | || || || ||| || || ||
Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135
Query 62807 TTTATTGAGATTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 62856
| | || | || | |||||| ||| | || | | |||| ||| | |
Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195
Query 62857 AATCAAATCGCCCATCTATT---ACAAAC-ATGTTCAAGGCAACAGATGCCAGATTACAA 62912
| | | | | |||| || |||||| ||| |||||| | || |||| ||||||
Sbjct 121196 AGACGAGGTGGC-ATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253
Query 62913 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 62972
|| || || || | | | | ||||| | || ||| ||| | || | |||||
Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313
Query 62973 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63032
|| | || || || | ||| || |||| |||||||| ||||| || || | ||||||
Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373
Query 63033 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 63092
|||||||| ||||| | || | ||| | || | | ||| | | | ||||| |
Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433
Query 63093 ATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63152
| | || ||| |||||||||||||| | |||||| ||||||| ||||| ||
Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493
Query 63153 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63212
|||||| |||| |||||| || | ||| | | | | |||||| |||| |
Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553
Query 63213 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63272
| || || ||||| || ||||||||||||||||| ||| || |||||||| | |||
Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613
Query 63273 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63332
||| || || || ||||||| | | |||| ||| | | || || || |||||
Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673
Query 63333 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63392
||||||||||| | ||| | | | ||||| | ||||| || || || || | ||| |
Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733
Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452
|| ||||| || | || | | ||| || || |||||||| || |||| ||||||||
Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793
Query 63453 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63512
| || || ||| | ||| || || || | ||| || || || ||
Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853
Query 63513 TTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATC 63572
|| ||||| || || || ||| || ||||| |||||||| || || || || ||
Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913
Query 63573 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63632
||| | || ||||| |||||||| || | ||| || || || || | |||
Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973
Query 63633 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63692
|| || |||| || || | ||| ||| | || ||||| ||||||||| | ||
Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033
Query 63693 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63751
|| || || | || || || || ||||| | ||| | || |||||||||||||||| |
Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092
Query 63752 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63811
|| ||| ||| ||| |||||||||| ||| |||||||||| || ||||| || |||||
Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152
Query 63812 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC 63871
||| ||||| || ||| ||| ||| ||||||| | || || | ||| | |
Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTTCAATTCGTCAGCGTGTTTTTGGAT 122212
Query 63872 TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63931
|| || |||| | ||||| || || |||||| || | || || ||||| ||
Sbjct 122213 GATGTCGTAGGTGTCTTTAGAAATCATAGGCGAATGTAAGTCAGTCTTTGGGTTAACGTA 122272
Query 63932 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 63991
| | | || || | | | | || | || | |||| || |||| || ||
Sbjct 122273 TTCGTACAACTCTTTCGAGATCTGGGAGAACTGCTTGGTGGTTTGTTTATGTAAGTTGGA 122332
Query 63992 TACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTG 64050
||||| | ||||||||| | ||| || || || ||||| || || || || ||| |
Sbjct 122333 AACGGCGAGTCTGGCGGCCAAAATAGCGTAGTCGGGATGGATAGTGGT-CATGTAGGCGG 122391
Query 64051 CTATTTCGGCTGCCAGAGTGTCCAATTC 64078
| | ||||| |||| ||||||| ||
Sbjct 122392 CGGTCTCGGCGGCCAAGTTGTCCAACTC 122419
Score = 185 bits (204), Expect = 1e-41
Identities = 580/885 (66%), Gaps = 29/885 (3%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| |||| || | |||||||| || || || || || |||| || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 33129
|||||||| || || || ||||| || || || || |||| ||| ||||| ||
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596
Query 33130 ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 33188
| |||||| || |||||||| || | ||| ||||| || ||||| || |
Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536
Query 33189 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 33248
||| | | ||| | ||| | || | ||||||| ||| ||||| || || || || ||
Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477
Query 33249 AATAGATCTAAC---GGTTTC-TTCACTCGGTGGATGCAATAAATGTTTAAACATCAAAC 33304
|| | ||| |||| || || || ||||| || |||| ||| |
Sbjct 294476 GATCTTTTCAACAATGGTTGGGTTTGGTCTGTTT-TGCAAG---TGGGAGAACAACAAGC 294421
Query 33305 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 33364
| || || ||| ||||| ||| ||||| | || || | |||||||| || || | |
Sbjct 294420 AGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGC 294361
Query 33365 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGA 33424
| ||||| || | ||| || | ||| || || ||||| || || ||||| ||||| |
Sbjct 294360 CAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAA 294301
Query 33425 TTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA 33481
| ||||| || || |||||||||| | ||| || || | | || || |||| |
Sbjct 294300 TACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAA 294241
Query 33482 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 33541
|||| | |||||| ||||||||||| || | || || || | || ||||| || |
Sbjct 294240 TCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGA 294181
Query 33542 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA-TACATT 33600
| | ||| ||| || ||| || | || || || ||||| | || | || ||
Sbjct 294180 ACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAAGTT 294122
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| || || |||||||| || || || || |||||||||||| | || || || | |
Sbjct 294121 TCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACC 294062
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| ||||| | | || ||| |||| ||||| || || || || ||| ||| |||
Sbjct 294061 TGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCA 294002
Query 33721 AAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776
|| || ||||| | || | || || || |||||| || | | |||||
Sbjct 294001 AAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCA 293946
Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836
|| | | | |||||| | || | ||||| | ||||| || || || || || ||
Sbjct 293945 GTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTT 293886
Query 33837 TTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAAC 33881
|| ||||| | |||||| || | ||| || ||||| || ||
Sbjct 293885 CTTGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCAC 293841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947137705280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |