Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4 324 2e-83 >seq4 Length=1381050 Score = 324 bits (358), Expect = 2e-83 Identities = 962/1468 (66%), Gaps = 22/1468 (1%) Strand=Plus/Plus Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||||||| ||||||||||||||||| | | || | || | ||||| | ||| Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016 Query 62688 AATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746 ||||| ||| |||| || || ||||| || | ||||| ||||| | | | || || Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075 Query 62747 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62806 ||||| |||| | ||||| | |||||||| | || || || ||| || || || Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135 Query 62807 TTTATTGAGATTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 62856 | | || | || | |||||| ||| | || | | |||| ||| | | Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195 Query 62857 AATCAAATCGCCCATCTATT---ACAAAC-ATGTTCAAGGCAACAGATGCCAGATTACAA 62912 | | | | | |||| || |||||| ||| |||||| | || |||| |||||| Sbjct 121196 AGACGAGGTGGC-ATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253 Query 62913 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 62972 || || || || | | | | ||||| | || ||| ||| | || | ||||| Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313 Query 62973 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63032 || | || || || | ||| || |||| |||||||| ||||| || || | |||||| Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373 Query 63033 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 63092 |||||||| ||||| | || | ||| | || | | ||| | | | ||||| | Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433 Query 63093 ATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63152 | | || ||| |||||||||||||| | |||||| ||||||| ||||| || Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493 Query 63153 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63212 |||||| |||| |||||| || | ||| | | | | |||||| |||| | Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553 Query 63213 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63272 | || || ||||| || ||||||||||||||||| ||| || |||||||| | ||| Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613 Query 63273 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63332 ||| || || || ||||||| | | |||| ||| | | || || || ||||| Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673 Query 63333 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63392 ||||||||||| | ||| | | | ||||| | ||||| || || || || | ||| | Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733 Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452 || ||||| || | || | | ||| || || |||||||| || |||| |||||||| Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793 Query 63453 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63512 | || || ||| | ||| || || || | ||| || || || || Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853 Query 63513 TTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATC 63572 || ||||| || || || ||| || ||||| |||||||| || || || || || Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913 Query 63573 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63632 ||| | || ||||| |||||||| || | ||| || || || || | ||| Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973 Query 63633 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63692 || || |||| || || | ||| ||| | || ||||| ||||||||| | || Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033 Query 63693 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63751 || || || | || || || || ||||| | ||| | || |||||||||||||||| | Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092 Query 63752 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63811 || ||| ||| ||| |||||||||| ||| |||||||||| || ||||| || ||||| Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152 Query 63812 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC 63871 ||| ||||| || ||| ||| ||| ||||||| | || || | ||| | | Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTTCAATTCGTCAGCGTGTTTTTGGAT 122212 Query 63872 TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63931 || || |||| | ||||| || || |||||| || | || || ||||| || Sbjct 122213 GATGTCGTAGGTGTCTTTAGAAATCATAGGCGAATGTAAGTCAGTCTTTGGGTTAACGTA 122272 Query 63932 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 63991 | | | || || | | | | || | || | |||| || |||| || || Sbjct 122273 TTCGTACAACTCTTTCGAGATCTGGGAGAACTGCTTGGTGGTTTGTTTATGTAAGTTGGA 122332 Query 63992 TACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTG 64050 ||||| | ||||||||| | ||| || || || ||||| || || || || ||| | Sbjct 122333 AACGGCGAGTCTGGCGGCCAAAATAGCGTAGTCGGGATGGATAGTGGT-CATGTAGGCGG 122391 Query 64051 CTATTTCGGCTGCCAGAGTGTCCAATTC 64078 | | ||||| |||| ||||||| || Sbjct 122392 CGGTCTCGGCGGCCAAGTTGTCCAACTC 122419 Score = 185 bits (204), Expect = 1e-41 Identities = 580/885 (66%), Gaps = 29/885 (3%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| |||| || | |||||||| || || || || || |||| || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 33129 |||||||| || || || ||||| || || || || |||| ||| ||||| || Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596 Query 33130 ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 33188 | |||||| || |||||||| || | ||| ||||| || ||||| || | Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536 Query 33189 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 33248 ||| | | ||| | ||| | || | ||||||| ||| ||||| || || || || || Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477 Query 33249 AATAGATCTAAC---GGTTTC-TTCACTCGGTGGATGCAATAAATGTTTAAACATCAAAC 33304 || | ||| |||| || || || ||||| || |||| ||| | Sbjct 294476 GATCTTTTCAACAATGGTTGGGTTTGGTCTGTTT-TGCAAG---TGGGAGAACAACAAGC 294421 Query 33305 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 33364 | || || ||| ||||| ||| ||||| | || || | |||||||| || || | | Sbjct 294420 AGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGC 294361 Query 33365 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGA 33424 | ||||| || | ||| || | ||| || || ||||| || || ||||| ||||| | Sbjct 294360 CAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAA 294301 Query 33425 TTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA 33481 | ||||| || || |||||||||| | ||| || || | | || || |||| | Sbjct 294300 TACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAA 294241 Query 33482 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 33541 |||| | |||||| ||||||||||| || | || || || | || ||||| || | Sbjct 294240 TCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGA 294181 Query 33542 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA-TACATT 33600 | | ||| ||| || ||| || | || || || ||||| | || | || || Sbjct 294180 ACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGTAAGTT 294122 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || || || |||||||| || || || || |||||||||||| | || || || | | Sbjct 294121 TCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACC 294062 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || ||||| | | || ||| |||| ||||| || || || || ||| ||| ||| Sbjct 294061 TGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCA 294002 Query 33721 AAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776 || || ||||| | || | || || || |||||| || | | ||||| Sbjct 294001 AAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCA 293946 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | | | |||||| | || | ||||| | ||||| || || || || || || Sbjct 293945 GTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTT 293886 Query 33837 TTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAAC 33881 || ||||| | |||||| || | ||| || ||||| || || Sbjct 293885 CTTGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCAC 293841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947137705280