Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 214 5e-50 >seq1 Length=2570408 Score = 214 bits (236), Expect = 5e-50 Identities = 374/541 (69%), Gaps = 10/541 (2%) Strand=Plus/Minus Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 |||| |||||| | || ||||| | | || || ||||| ||||| || || || | Sbjct 2441670 TGGTACCCATGTTGCGGGTGTTCAATGACACAGCCAGGTATGTCGATCAAGGCGGCAATA 2441611 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 ||||| ||| ||||||||| ||||| | ||||| |||| ||| || || || | Sbjct 2441610 AGCGCCCAGGTGCGTTTGCTGTGTATTTGGAGCCATGGCATGGCGACATATTCGAAGTGA 2441551 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 ||||||||||||||||| || ||||||||| || | ||| | || || ||||| | | Sbjct 2441550 TTGAGCTCCGGAAAAACCACGGCAAAGAGGAAATGAGGGCAAGAGACCTCTTCTACGGAT 2441491 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||||| | ||| || |||||| | || || | | || ||||||||||||| Sbjct 2441490 TGTGGGTCCCCGACTTGTTCATGAAGAGAGTCAAGAACAATGAAAAATGGTCACTCTTTT 2441431 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 || |||| || || | || || || | || || || | | || || | Sbjct 2441430 CGCCTGACGATGCGCCCGGCTTGTCTGACGTGTATGGCGAAGAGTTCGACAGCCTTTATG 2441371 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA-CAATTCCCGCACAGAAGCTATGGTTT 364128 ||| || || || || | ||| | | ||| | | || |||||||||||| Sbjct 2441370 AAAGTTACGAGAAGGCCGGCATGGC-CTTGAGAACTGTGGAAGCCCAGAAGCTATGGAGC 2441312 Query 364129 GCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC 364188 |||||| |||| || |||| ||||| ||| ||||||||| | ||||||||||||||| Sbjct 2441311 GCCATCTTGGAGTCTCAGACGGAGACCGGATTGCCCTATATGCTCTACAAAGATTCGTGC 2441252 Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC----AACCTATGTAC 364244 || || ||||| |||||| || || | |||||||| || | | || |||||||| Sbjct 2441251 AATCGGAAGTCGAACCAGAAGAACTTGGGTACAAT----CAAATCTTCGAATCTATGTAC 2441196 Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 |||||| |||||||| | |||| |||||||| || || |||||| | || ||| | || Sbjct 2441195 TGAGATTGTTGAATACTCTTCTCCTGACGAGACCGCTGTTTGTAACTTGGCATCGTTGGC 2441136 Query 364305 G 364305 | Sbjct 2441135 G 2441135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256