Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 seq6 127 2e-24 seq4 84.2 2e-11 >seq1 Length=2570408 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||||||| | Sbjct 1137444 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTC 1137385 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | |||||||||||| | ||||| ||||| ||||||||||| || || || || Sbjct 1137384 CTCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGA 1137325 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || || ||| |||| | | ||| |||||| | ||||||| |||| | | || || Sbjct 1137324 CCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTA 1137265 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || || |||| || ||||| ||||||||||| || Sbjct 1137264 CAACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGG 1137214 >seq6 Length=1120317 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | || || || || || || || || | |||||| | |||||||| | Sbjct 961473 AAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCGAATCT 961532 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | || ||| ||||| ||||| ||||| || || || || Sbjct 961533 TCCGACACCATCGACAACGTTAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCAGAC 961592 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || || ||| |||| | | ||| |||||| | ||||| | ||||| | | ||| || Sbjct 961593 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTAC 961652 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| |||| || || || ||||||||||| || Sbjct 961653 AACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 961702 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | |||||| | |||||||| | | Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| || ||| ||||| ||||| || || || || || Sbjct 962220 GACACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 962279 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | || | | ||| |||||| | ||||| | ||||| | | ||| || ||| Sbjct 962280 CAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAAC 962339 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || | || || || || ||||||||||| || Sbjct 962340 ATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 962386 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || | || || | ||||| || || | Sbjct 962388 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCC 962447 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| || || ||||| ||||| || || || || || Sbjct 962448 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 962507 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | || || |||||| | ||||| | ||||| || || || ||| Sbjct 962508 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACAAC 962567 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||||| |||||||| | || || || || ||||||||||| || | |||| Sbjct 962568 ATCCAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGAGGTGGCCAATAA 962621 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || | || || | ||||| || | | Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| || || ||||| ||||| || || || || || Sbjct 961764 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961823 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || || |||||| | ||||| | ||||| | || || ||| Sbjct 961824 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAAC 961883 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || |||| || || || ||||||||||| || Sbjct 961884 ATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 961930 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || | || || | ||||| || | | Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| ||||| ||||| ||||| || || || || || Sbjct 961992 GACACCATTGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 962051 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | ||| || ||| | ||||| | |||| | || || ||| Sbjct 962052 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 962111 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| || || || ||||||||||| || Sbjct 962112 ATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 962158 >seq4 Length=1381050 Score = 84.2 bits (92), Expect = 2e-11 Identities = 192/284 (68%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 104886 GCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAA 104945 |||||||||||| |||||||| ||||| || | | | || | |||||| | ||||||| Sbjct 294422 GCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAA 294363 Query 104946 GCCAGGTAGAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGA 105005 |||||| | ||| | | |||| || || |||| | |||||| ||| || Sbjct 294362 GCCAGGCATCTTACCTCTCT-----TCTTCAA-CCAGAAGATAGAAGCAAAGGAACCAGA 294309 Query 105006 GAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGT--T 105063 ||| || | |||||||||| |||||| || |||| | ||| |||| ||| || | Sbjct 294308 GAAGAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGC-GTCGT 294250 Query 105064 TGACTTTCAATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGCTCG 105123 | | | ||||||| || |||||| |||||| |||| || |||| ||| Sbjct 294249 CGTCACT-AATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCG 294191 Query 105124 ATGGCATTCAAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA 105167 ||||| || || | ||| ||||| ||||| || ||||| Sbjct 294190 ATGGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTA 294147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935958081240