Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4 313 3e-80
>seq4
Length=1381050
Score = 313 bits (346), Expect = 3e-80
Identities = 819/1236 (66%), Gaps = 20/1236 (2%)
Strand=Plus/Plus
Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542
||||||| ||||||||||||||||| | | || | || | ||||| | |||
Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016
Query 62543 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601
||||| ||| |||| || || ||||| || | ||||| ||||| | | | || ||
Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075
Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661
||||| |||| | ||||| | |||||||| | || || || ||| || || ||
Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135
Query 62662 TTTATTGAGATTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 62711
| | || | || | |||||| ||| | || | | |||| ||| | |
Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195
Query 62712 AATCAAATCGCCCATCTATT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAA 62767
| | | | | |||| || |||||| ||| ||| || | || |||| ||||||
Sbjct 121196 AGACGAGGTGGC-ATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253
Query 62768 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 62827
|| || || || | | | | ||||| | || ||| ||| | || | |||||
Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313
Query 62828 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 62887
||| | || || || | ||| || |||| |||||||| ||||| || || | ||||||
Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373
Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 62947
|||||||| ||||| | || | ||| | || | | ||| | | | ||||| |
Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433
Query 62948 ATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63007
| | || ||| ||||||||||||||| | |||||| ||||||| ||||| ||
Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493
Query 63008 CAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63067
|||||| ||| |||||| || | ||| | | | | |||||| |||| |
Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553
Query 63068 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63127
| || || ||||| || ||||||||||||||||| ||| || |||||||| | |||
Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613
Query 63128 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63187
||| || || || ||||||| | | |||| ||| | | || || || |||||
Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673
Query 63188 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63247
||||||||||| | ||| | | | ||||| | ||||| || || || || | ||| |
Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733
Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307
|| ||||| || | || | | ||| || || ||||| ||||| ||||| ||||| ||
Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793
Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63367
| || || ||| | ||| || || || | ||| || || || ||
Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853
Query 63368 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 63427
|| ||||| || || || ||| || || || ||||| || || || || || ||
Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913
Query 63428 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63487
||| | || ||||| |||||||| || | ||| || || || || | |||
Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973
Query 63488 GGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63547
|| || ||||||| || | ||| ||| | || ||||| ||||||||| | ||
Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033
Query 63548 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63606
|| || || | || || || || ||||| | ||| | || |||||||||||||||| |
Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092
Query 63607 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63666
|| ||| ||| ||| |||||||||| ||| |||||||||| || ||||| || |||||
Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152
Query 63667 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702
||| ||||| || ||| ||| ||| |||||||
Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188
Score = 181 bits (200), Expect = 1e-40
Identities = 569/873 (65%), Gaps = 39/873 (4%)
Strand=Plus/Minus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|||||||| |||| || | |||||||| || || || ||||| | || || || |||
Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 32486
|||||||| |||||||| ||||| || || || || |||| ||| ||||| ||
Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596
Query 32487 ATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 32545
| |||||| || ||||| || || | ||| ||||| || ||||| || |
Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536
Query 32546 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 32605
||| | | ||| | ||| | || | ||||||| ||| || || || || || || ||
Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477
Query 32606 AATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT---------AAATGTTTAAACAT 32656
|||||| ||| || | | ||| | | || || ||||
Sbjct 294476 ----GATCTT-----TTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAA 294426
Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716
||| || || || ||| ||| | ||| ||||| | || || || |||||||| || ||
Sbjct 294425 CAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGT 294366
Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776
| || ||||| || | ||| || | ||| || || || ||||| || ||||| ||
Sbjct 294365 CAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAA 294306
Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTC 32833
|||||| ||||| || || |||||||||| | ||| || || | | || || |||
Sbjct 294305 GAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTC 294246
Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893
| ||||| | |||||| ||||||||||| || | || || || | || || ||
Sbjct 294245 ACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGC 294186
Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-T 32952
|| || | ||| ||| || ||| || | || || |||||||| | || | |
Sbjct 294185 GTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGT 294127
Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012
| |||| || || |||||||| || ||||| || |||||||| ||| | || || |
Sbjct 294126 AAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAG 294067
Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 33072
| | ||| ||||| | | || ||| | || ||||| || || || || ||| ||
Sbjct 294066 TGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGG 294007
Query 33073 CTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTA 33128
| ||||| || ||||| | || | || || || |||||| || | |
Sbjct 294006 CAGCAAAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTG 293951
Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188
||||| || | | | |||||| | || | ||||| | ||||| || || || ||
Sbjct 293950 TTCCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCA 293891
Query 33189 GCCTTTTTATACATATTCCAGATGTCATGATAT 33221
|| || || ||||| | |||||| || || |||
Sbjct 293890 GCTTTCTTGTACATTTGCCAGATCTCGTGGTAT 293858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631936636800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |