Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 313 3e-80 >seq4 Length=1381050 Score = 313 bits (346), Expect = 3e-80 Identities = 819/1236 (66%), Gaps = 20/1236 (2%) Strand=Plus/Plus Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542 ||||||| ||||||||||||||||| | | || | || | ||||| | ||| Sbjct 120957 GCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCA 121016 Query 62543 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601 ||||| ||| |||| || || ||||| || | ||||| ||||| | | | || || Sbjct 121017 AATGG-TAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCACACCGAGAGCAATTGG 121075 Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661 ||||| |||| | ||||| | |||||||| | || || || ||| || || || Sbjct 121076 TCTATTTCTCATGTTAGAACGCTTGGCTTCTGGCACTGGGTAGTAGTTACGGTCAATGAT 121135 Query 62662 TTTATTGAGATTTC---TGACAA--TTACT---TTGACCACATCCTTCA--GTTTGAGAA 62711 | | || | || | |||||| ||| | || | | |||| ||| | | Sbjct 121136 TCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTAACTTTTCAAAGTTGTACCA 121195 Query 62712 AATCAAATCGCCCATCTATT---ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAA 62767 | | | | | |||| || |||||| ||| ||| || | || |||| |||||| Sbjct 121196 AGACGAGGTGGC-ATCTTTTTCAACAAACGATGG-CAAGGCGATGGAAGCCAAGTTACAA 121253 Query 62768 ACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTG 62827 || || || || | | | | ||||| | || ||| ||| | || | ||||| Sbjct 121254 ACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGCACAAGTTGGAAGACTTG 121313 Query 62828 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 62887 ||| | || || || | ||| || |||| |||||||| ||||| || || | |||||| Sbjct 121314 ATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAAT 121373 Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 62947 |||||||| ||||| | || | ||| | || | | ||| | | | ||||| | Sbjct 121374 GGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACAATTTTTGTGCCTTAACA 121433 Query 62948 ATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCC 63007 | | || ||| ||||||||||||||| | |||||| ||||||| ||||| || Sbjct 121434 GTTTGTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAATTGTTCGAATTCGTCACCG 121493 Query 63008 CAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63067 |||||| ||| |||||| || | ||| | | | | |||||| |||| | Sbjct 121494 TAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGT 121553 Query 63068 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63127 | || || ||||| || ||||||||||||||||| ||| || |||||||| | ||| Sbjct 121554 TCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTG 121613 Query 63128 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63187 ||| || || || ||||||| | | |||| ||| | | || || || ||||| Sbjct 121614 ATTTCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATCAAAGATGTCCGAGTGCCAA 121673 Query 63188 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63247 ||||||||||| | ||| | | | ||||| | ||||| || || || || | ||| | Sbjct 121674 GGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGG 121733 Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307 || ||||| || | || | | ||| || || ||||| ||||| ||||| ||||| || Sbjct 121734 GCAGTGTTGTTGAACACACGGACCATAGGGATGATACCGTTGGAGGTACCGTTGGTACCA 121793 Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63367 | || || ||| | ||| || || || | ||| || || || || Sbjct 121794 GCAATGTAAGCACCAGTACTACGGATGTTGTGGATGTGCAAACCAATACCACCGGCAGAC 121853 Query 63368 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 63427 || ||||| || || || ||| || || || ||||| || || || || || || Sbjct 121854 TTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTC 121913 Query 63428 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63487 ||| | || ||||| |||||||| || | ||| || || || || | ||| Sbjct 121914 ATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTA 121973 Query 63488 GGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63547 || || ||||||| || | ||| ||| | || ||||| ||||||||| | || Sbjct 121974 GGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGTTGTAAGTCTCAATAACACGTTCG 122033 Query 63548 ATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63606 || || || | || || || || ||||| | ||| | || |||||||||||||||| | Sbjct 122034 ATGTCGTCACCG-TGGATACCAACAGCGACTCTCATGATCAAGTGCTGAGGTCTTTCAGC 122092 Query 63607 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63666 || ||| ||| ||| |||||||||| ||| |||||||||| || ||||| || ||||| Sbjct 122093 GACTTTGCCGTTGATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 122152 Query 63667 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 ||| ||||| || ||| ||| ||| ||||||| Sbjct 122153 GTAGTTGAAGTCACGGTCGAAAACAATGGCCGAGTT 122188 Score = 181 bits (200), Expect = 1e-40 Identities = 569/873 (65%), Gaps = 39/873 (4%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| |||| || | |||||||| || || || ||||| | || || || ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATA-AAttttt--ttAAATCCCAATTCAGAA 32486 |||||||| |||||||| ||||| || || || || |||| ||| ||||| || Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTA---CCCAAGGCAACC 294596 Query 32487 ATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT- 32545 | |||||| || ||||| || || | ||| ||||| || ||||| || | Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536 Query 32546 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 32605 ||| | | ||| | ||| | || | ||||||| ||| || || || || || || || Sbjct 294535 AAGCTGCA-TGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477 Query 32606 AATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT---------AAATGTTTAAACAT 32656 |||||| ||| || | | ||| | | || || |||| Sbjct 294476 ----GATCTT-----TTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAA 294426 Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 ||| || || || ||| ||| | ||| ||||| | || || || |||||||| || || Sbjct 294425 CAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGT 294366 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 | || ||||| || | ||| || | ||| || || || ||||| || ||||| || Sbjct 294365 CAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAA 294306 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTC 32833 |||||| ||||| || || |||||||||| | ||| || || | | || || ||| Sbjct 294305 GAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTC 294246 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 | ||||| | |||||| ||||||||||| || | || || || | || || || Sbjct 294245 ACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGC 294186 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-T 32952 || || | ||| ||| || ||| || | || || |||||||| | || | | Sbjct 294185 GTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATA-ACGAGT 294127 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 | |||| || || |||||||| || ||||| || |||||||| ||| | || || | Sbjct 294126 AAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAG 294067 Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 33072 | | ||| ||||| | | || ||| | || ||||| || || || || ||| || Sbjct 294066 TGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGG 294007 Query 33073 CTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTGTTAGTTTA 33128 | ||||| || ||||| | || | || || || |||||| || | | Sbjct 294006 CAGCAAAGAAGGCCAAGA----TTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTG 293951 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 ||||| || | | | |||||| | || | ||||| | ||||| || || || || Sbjct 293950 TTCCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCA 293891 Query 33189 GCCTTTTTATACATATTCCAGATGTCATGATAT 33221 || || || ||||| | |||||| || || ||| Sbjct 293890 GCTTTCTTGTACATTTGCCAGATCTCGTGGTAT 293858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800