Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 246 3e-60 >seq4 Length=1381050 Score = 246 bits (272), Expect = 3e-60 Identities = 626/934 (67%), Gaps = 34/934 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||||| || | ||| | ||||| ||||| || ||||| || | Sbjct 294725 CATGACACCGGCCTTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGC 294666 Query 92850 CAAAGATATCGAATTCACT--AGT-GATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903 ||| || || | ||| | ||| || ||| || || |||| || ||||||| || Sbjct 294665 CAAGGAGAT-GTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTAC 294607 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 | ||| | ||| ||||| || || || || || | ||| || ||||||| || Sbjct 294606 C---CAAGGCAACCAACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCT 294550 Query 92964 AATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022 ||||| || | | | | || || | ||| ||||| ||||| ||||| ||||| | Sbjct 294549 TGTTCATACCCAACAAGC-TGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAA 294491 Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTA---TTTGGTGGTTTTTGTACGACATAA 93079 || ||||| | | ||| | | || | | |||||| ||||| | | | Sbjct 294490 ACAGCTTCGGTAATGATCTTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGA- 294432 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | ||| ||||| ||||||||||| || ||||||||||| || | |||||||| ||| Sbjct 294431 --GAACAACAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTG 294374 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| || || || || | | |||| ||||| | ||| || || |||||||| | Sbjct 294373 GAGAAAGTCAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAA 294314 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 ||||| || || |||||||| ||||| ||||| || || | | ||| | || ||| Sbjct 294313 CCAGAGAAGAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCG 294254 Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 | || |||||| | |||||||| ||||| || ||||| || || || | |||| Sbjct 294253 TCGTCGTCACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGA-TGTT 294195 Query 93320 -TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 ||||| ||||| || | | | || || | | ||| ||||| || || || || Sbjct 294194 GTCGATGGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAA 294135 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 | || || |||| || |||| || ||||| |||||||| |||||||||||| | Sbjct 294134 TAACGAGTAAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTT 294075 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 ||||| |||| ||||||||| || || | || || | ||||| ||||| ||||| Sbjct 294074 GGCTTCAGTGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACC 294015 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAA--ATG--TTTCTCATCATC-T 93553 ||| || || ||||| || ||||| || | || ||| | | | | || | || Sbjct 294014 ATCAGAGGCAGCAAAGAAGGCCAAGAT----TCTAGAAATGAAGAATCTTTCGTTGTCGG 293959 Query 93554 TTAAGCTTATCCCAATC--GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611 | |||| | | ||| || || | ||||| | |||| |||||| | ||||| | Sbjct 293958 TCAAGC-TGTTCCAGTCTTGGGT--GTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGA 293902 Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGA 93671 | || ||||| ||||| |||||||| | ||| || || || ||| | || || || | Sbjct 293901 AAGAAGCTTCAGCTTTCTTGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCA 293842 Query 93672 CAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 | ||||| ||||||| ||||| || || || || Sbjct 293841 CGTAACGACTAGGGTTTTCTTTAAGCAAAGGTTC 293808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860744313920