Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq4 246 3e-60
>seq4
Length=1381050
Score = 246 bits (272), Expect = 3e-60
Identities = 626/934 (67%), Gaps = 34/934 (4%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || | ||| | ||||| ||||| || ||||| || |
Sbjct 294725 CATGACACCGGCCTTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGC 294666
Query 92850 CAAAGATATCGAATTCACT--AGT-GATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903
||| || || | ||| | ||| || ||| || || |||| || ||||||| ||
Sbjct 294665 CAAGGAGAT-GTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTAC 294607
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
| ||| | ||| ||||| || || || || || | ||| || ||||||| ||
Sbjct 294606 C---CAAGGCAACCAACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCT 294550
Query 92964 AATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022
||||| || | | | | || || | ||| ||||| ||||| ||||| ||||| |
Sbjct 294549 TGTTCATACCCAACAAGC-TGCATGGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAA 294491
Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTA---TTTGGTGGTTTTTGTACGACATAA 93079
|| ||||| | | ||| | | || | | |||||| ||||| | | |
Sbjct 294490 ACAGCTTCGGTAATGATCTTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGA- 294432
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| ||| ||||| ||||||||||| || ||||||||||| || | |||||||| |||
Sbjct 294431 --GAACAACAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTG 294374
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| || || || || | | |||| ||||| | ||| || || |||||||| |
Sbjct 294373 GAGAAAGTCAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAA 294314
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259
||||| || || |||||||| ||||| ||||| || || | | ||| | || |||
Sbjct 294313 CCAGAGAAGAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCG 294254
Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319
| || |||||| | |||||||| ||||| || ||||| || || || | ||||
Sbjct 294253 TCGTCGTCACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGA-TGTT 294195
Query 93320 -TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
||||| ||||| || | | | || || | | ||| ||||| || || || ||
Sbjct 294194 GTCGATGGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAA 294135
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
| || || |||| || |||| || ||||| |||||||| |||||||||||| |
Sbjct 294134 TAACGAGTAAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTT 294075
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
||||| |||| ||||||||| || || | || || | ||||| ||||| |||||
Sbjct 294074 GGCTTCAGTGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACC 294015
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAA--ATG--TTTCTCATCATC-T 93553
||| || || ||||| || ||||| || | || ||| | | | | || | ||
Sbjct 294014 ATCAGAGGCAGCAAAGAAGGCCAAGAT----TCTAGAAATGAAGAATCTTTCGTTGTCGG 293959
Query 93554 TTAAGCTTATCCCAATC--GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611
| |||| | | ||| || || | ||||| | |||| |||||| | ||||| |
Sbjct 293958 TCAAGC-TGTTCCAGTCTTGGGT--GTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGA 293902
Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGA 93671
| || ||||| ||||| |||||||| | ||| || || || ||| | || || || |
Sbjct 293901 AAGAAGCTTCAGCTTTCTTGTACATTTGCCAGATCTCGTGGTATCTGAGAGGGAAGATCA 293842
Query 93672 CAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705
| ||||| ||||||| ||||| || || || ||
Sbjct 293841 CGTAACGACTAGGGTTTTCTTTAAGCAAAGGTTC 293808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860744313920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |