Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6 141 8e-29 seq1 138 1e-27 >seq6 Length=1120317 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| |||||||| || ||||| | ||||| ||| | || Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||||| ||||||||||| ||||||||||| || || Sbjct 961764 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 961823 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || || || || || || || | | || | || || |||||| Sbjct 961824 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAAC 961883 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||||||||||||| | || || || ||| ||||| | || ||| Sbjct 961884 ATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 961931 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| |||||||| || ||||| | ||||| ||| || || Sbjct 962388 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCC 962447 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||||| ||||||||||| ||||||||||| || || Sbjct 962448 GACACCATCGACAACGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 962507 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || || || || || || || | | || |||| || |||||| Sbjct 962508 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACAAC 962567 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| ||| | || || || ||| ||||| | || || Sbjct 962568 ATCCAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGAGGTGG 962614 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || || ||||| || | || | ||||| ||| | || Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||||||||||||||||| ||||||||||| || || Sbjct 962220 GACACCATCGACAACGTCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 962279 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || || || || || | | ||| | ||||| |||||| Sbjct 962280 CAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAAC 962339 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || || ||| ||||| | || ||| Sbjct 962340 ATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGGT 962387 Score = 131 bits (144), Expect = 1e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 22205 ATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTG 22264 |||||| | || ||||||||||| || || || || |||||||| || | || | | Sbjct 961462 ATACATCAATTAAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGG 961521 Query 22265 AAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTA 22324 |||| ||| | |||| ||| | ||| | | ||| || || ||||||||||| |||| Sbjct 961522 AAGTCGAATCTTCCGACACCATCGACAACGTTAAATCCAAGATCCAAGACAAGGAAGGTA 961581 Query 22325 TTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCG 22384 ||||||| || || ||| | | || |||||||| || || || || || | | ||| Sbjct 961582 TTCCACCAGACCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCT 961641 Query 22385 TCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAG 22444 | ||||| |||||||| ||||| ||||| || | || || || ||| ||||| | || | Sbjct 961642 TGTCCGACTACAACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTG 961701 Query 22445 GT 22446 || Sbjct 961702 GT 961703 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || |||||||| || ||||| | ||||| ||| | || Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | ||||| || || ||||||||||| ||||| ||||| || || Sbjct 961992 GACACCATTGACAACGTCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 962051 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| ||||| || || || | || | || || |||||| Sbjct 962052 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 962111 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||| ||||| | || ||| Sbjct 962112 ATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGT 962159 >seq1 Length=2570408 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || |||||||||||||| || | || | ||||| || || Sbjct 1137443 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1137384 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || |||| || || |||||||| || ||||| ||||| || Sbjct 1137383 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGAC 1137324 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || |||||||| || || || || ||| | ||| | || || ||| Sbjct 1137323 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTAC 1137264 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || |||||| | || || || ||| ||||| | || ||| Sbjct 1137263 AACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGGT 1137213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727959076520