Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq6 196 9e-45
seq1 181 2e-40
>seq6
Length=1120317
Score = 196 bits (216), Expect = 9e-45
Identities = 171/213 (80%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||||||||| || ||||| | || || || ||
Sbjct 962372 CAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 962313
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| ||||| || || | |||||| ||||| |||||||| |||||||||||
Sbjct 962312 TTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTC 962253
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||||||| ||||||||||| | ||||| ||||||||||| |||||
Sbjct 962252 TTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 962193
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||| ||||| || |||||
Sbjct 962192 CTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Score = 188 bits (208), Expect = 1e-42
Identities = 170/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || ||||| | || || || ||
Sbjct 961688 CAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 961629
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| ||||| || || | |||||| ||||| |||||||| |||||||||||
Sbjct 961628 TTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTC 961569
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | || ||| ||||||||||| | ||||| ||||||||||| |||||
Sbjct 961568 TTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 961509
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | |||||||||||| || ||||||
Sbjct 961508 CTTACCGGTCAAGGTCTTGACGAAAATTTGCATT 961475
Score = 187 bits (206), Expect = 5e-42
Identities = 169/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| |||||||||||||| || || || || || || || ||
Sbjct 961916 CAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTC 961857
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | |||||| ||||| |||||||| |||||||||||
Sbjct 961856 TTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTC 961797
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | ||||||| ||||||||||| | ||||| ||||| || ||||||||
Sbjct 961796 TTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGT 961737
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||| || || |||||
Sbjct 961736 CTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || ||||| || || || ||
Sbjct 962600 CAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCCGTC 962541
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | |||||| ||||| |||||||| |||||||||||
Sbjct 962540 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTC 962481
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | ||||||| ||||||||||| | ||||| ||||| || ||||||||
Sbjct 962480 TTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGATGGT 962421
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||| || || |||||
Sbjct 962420 CTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || || || || || ||
Sbjct 962144 CAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTC 962085
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || ||||| || || | |||||| ||||| ||||| || |||||||||||
Sbjct 962084 TTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTTGTC 962025
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| ||||| || ||||||||
Sbjct 962024 TTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGT 961965
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||| ||||| || |||||
Sbjct 961964 CTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
>seq1
Length=2570408
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || |||||||| ||||||||||| || || || | || || |||||
Sbjct 1137228 CAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 1137287
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| ||||| || || | |||||| ||||| ||||| || ||||| |||||
Sbjct 1137288 TTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTC 1137347
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| ||||||||||| | || || ||||||||||| |||||
Sbjct 1137348 TTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGT 1137407
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 1137408 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 1137440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622307837760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |