Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 210 4e-49 >seq4 Length=1381050 Score = 210 bits (232), Expect = 4e-49 Identities = 573/864 (66%), Gaps = 25/864 (3%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||| || |||||| ||||||||||| || | || | || |||||||||||| ||| Sbjct 293860 ACCACGAGATCTGGCAAATGTACAAGAAAGCTGAAGCT-TCTTTCTGGACCGCCGAAGAG 293918 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | ||| || || ||||| | |||| | || | || ||||||| || ||| Sbjct 293919 CTCGACTTGAGTAAAGACACCCAAGACTGGAACAGCTTGACCGACAACGAAAGATTCTTC 293978 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 | | || |||||||||| || |||||||| || || ||||| || ||| ||| | Sbjct 293979 ATTTCTAGAATCTTGGCCTTCTTTGCTGCCTCTGATGGTATCGTCAACGAAAACTTGGTC 294038 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | ||| || |||||| | ||| || || |||||||| ||||| || Sbjct 294039 GAAAACTTCTCCTCTGAAGTGCAGGTCACTGAAGCCAAATGTTTCTACGGTTTCCAAATC 294098 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 || || ||| | ||||| || ||| | | || | |||| |||||| |||| Sbjct 294099 ATGATGGAAAACATCCACTCCGAAACTTACTCGTTATTGATTGACACCTACATCAAGGAT 294158 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 || || | || ||||||| ||||| || | || || ||||||||||||||| Sbjct 294159 CCAAAGGAAGCTGACTTCTTGTTCAACGCCATCGACAACATCCCATGCATCAAGAAGAAG 294218 Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCC-CGACGCAACGTTCGGCGAGAGGCTGGT 42709 || |||||||| | | ||||| || | | |||||| |||||| || || |||| Sbjct 294219 GCCGACTGGGCTTTGAGATGGATT-AGTGACGACGACGCTTTGTTCGGTGAAAGATTGGT 294277 Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 |||||| |||||||||| || || |||||||| || |||| || || ||||||||| | Sbjct 294278 TGCCTTTGCCGCCGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCTATCTTCTGGTT 294337 Query 42770 CAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 ||| ||| |||| |||||| || | || ||||| ||||| | ||| | | |||| Sbjct 294338 GAAGAAGAGAGGTAA-GATGCCTGGCTTGACTTTCTCCAACGAGTTGATCTGTCGTGACG 294396 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT------CAGGCACA 42882 | || |||| | |||||||||||| | ||||||| |||| | ||| | || Sbjct 294397 AAGGTTTGCACACCGACTTTGCCTGCTTGTTGTTCTC---CCACTTGCAAAACAGAC-CA 294452 Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942 | ||| || | || ||||| || || || || ||||| || || | Sbjct 294453 AACCC---AACCA--TTGTTGAAAAGATCATTACCGAAGCTGTTTCCATCGAAAAAGAAT 294507 Query 42943 TCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGT 43002 || |||| | | |||| | || | || |||||| | ||| | |||||| | | Sbjct 294508 TCTTCACCGATGCTTTGCCATGCAGCTTGTTGGGTATGAACAAGGACTTGATGTGCCAAT 294567 Query 43003 ACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGCCGCCTCTACAA 43060 || | ||| |||||||||| | || |||| ||||| | ||||||| Sbjct 294568 ACGTTGAGTTCGTCGCCGACAGATTGTTGGTTGCC--TTGGGTAACGAAAAGTTCTACAA 294625 Query 43061 CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 | | ||| |||||||| ||||| |||||||| |||| || ||||||||||| || Sbjct 294626 CGTCACCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTT 294685 Query 43121 CGAGAAGCGCGTCGCCGACTACCA 43144 ||| ||| | ||| || ||||| Sbjct 294686 CGAAAAGAGAGTCAGTGATTACCA 294709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339105566080