Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 3e-20
seq1 87.8 4e-12
>seq6
Length=1120317
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| |||||||||||| || ||||| | || || | |||||||| |||||
Sbjct 961906 TGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGC 961847
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || ||||| |||| | || || ||| || ||||| || || ||||||||
Sbjct 961846 TTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTTA 961787
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || || | ||| ||||| ||||| | ||||| ||||| ||||||
Sbjct 961786 GACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCGGTC 961727
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| ||||||||| || || |||||
Sbjct 961726 AAAGTCTTGACAAAGATTTGCAT 961704
Score = 105 bits (116), Expect = 2e-17
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| | || | |||||||| ||||| || || || ||
Sbjct 961667 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAA 961608
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | || || ||| || ||||| || || ||||| || | ||| |||||
Sbjct 961607 GATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTAACGTT 961548
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||||| ||||| | || || ||||| ||||||| ||||||||
Sbjct 961547 GTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGAC 961488
Query 288462 GAATATCTGCATT 288474
||| || ||||||
Sbjct 961487 GAAAATTTGCATT 961475
>seq1
Length=2570408
Score = 87.8 bits (96), Expect = 4e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| | | || | || ||||| ||||| || || || |||
Sbjct 1137250 TCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCAATTGCTTACCGGCAAAG 1137309
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | || || |||||| |||||||| || ||||| || | || || ||
Sbjct 1137310 ATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTGGACTTGACATTG 1137369
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| || || ||||| | || || ||||| ||||| | ||||||||||
Sbjct 1137370 TCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACG 1137429
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1137430 AAAATTTGCAT 1137440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654279085424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |