Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 114 3e-20 seq1 87.8 4e-12 >seq6 Length=1120317 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| |||||||||||| || ||||| | || || | |||||||| ||||| Sbjct 961906 TGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGC 961847 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||| |||| | || || ||| || ||||| || || |||||||| Sbjct 961846 TTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTTA 961787 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || ||||| || || | ||| ||||| ||||| | ||||| ||||| |||||| Sbjct 961786 GACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCGGTC 961727 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | ||||||||| || || ||||| Sbjct 961726 AAAGTCTTGACAAAGATTTGCAT 961704 Score = 105 bits (116), Expect = 2e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | |||||||| ||||| || || || || Sbjct 961667 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAA 961608 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | || || ||| || ||||| || || ||||| || | ||| ||||| Sbjct 961607 GATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTAACGTT 961548 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || ||||| ||||||| |||||||| Sbjct 961547 GTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTGAC 961488 Query 288462 GAATATCTGCATT 288474 ||| || |||||| Sbjct 961487 GAAAATTTGCATT 961475 >seq1 Length=2570408 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || | || ||||| ||||| || || || ||| Sbjct 1137250 TCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCAATTGCTTACCGGCAAAG 1137309 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || || |||||| |||||||| || ||||| || | || || || Sbjct 1137310 ATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTGGACTTGACATTG 1137369 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || ||||| | || || ||||| ||||| | |||||||||| Sbjct 1137370 TCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCGGTTAAAGTCTTGACG 1137429 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 1137430 AAAATTTGCAT 1137440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654279085424