Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 8e-15 >seq4 Length=1381050 Score = 96.9 bits (106), Expect = 8e-15 Identities = 283/427 (66%), Gaps = 12/427 (3%) Strand=Plus/Plus Query 243318 CGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC-ATCTTTTGGCTGCGGAACAAAG 243376 ||| ||||||||| | || || || || ||| | ||||| ||| || ||| | || Sbjct 294290 CGTCGAAGGTATTTTCTTCTCTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAG 294348 Query 243377 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 || |||||||||| | | | || |||||||| ||| |||| ||||| || | ||| Sbjct 294349 GTAAGATGCCTGGCTTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCACA 294408 Query 243437 AACAGTTCGGTGAGCTTAT-GTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACG--- 243492 | || | |||| | || || | | || |||| |||| | ||| Sbjct 294409 CCGACTTTGCCT-GCTTGTTGTTCTCCCACTTGCAAAACAG---ACCAAACCCAACCATT 294464 Query 243493 GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATT 243552 || || | ||||| || ||||| ||| | |||||| |||||| | ||| ||| | Sbjct 294465 GTTGAAAAGATCATTACCGAAGCTGTTTCCATCGAAAAAGAATTCTTCACCGATGCTTTG 294524 Query 243553 CCATGCCGGCTTATTGGC-ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGC 243611 |||||| | ||| |||| |||||| || | ||| | || ||| | || ||||| || Sbjct 294525 CCATGCAG-CTTGTTGGGTATGAACAAGGACTTGATGTGCCAATACGTTGAGTTCGTCGC 294583 Query 243612 CGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGC 243671 |||| | | || | || | ||| | || || | |||||| || ||||| || | Sbjct 294584 CGACAGATTGTTGGTTGCCTTGGGTAACGAAAAGTTCTACAACGTCACCAACCCATTCGA 294643 Query 243672 CTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGA 243731 ||| ||||| ||| || | || || || ||||||||||||||| | |||||||| Sbjct 294644 CTTCATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTCAGTGA 294703 Query 243732 TTATCAA 243738 ||| ||| Sbjct 294704 TTACCAA 294710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879886954800