Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
>seq6
Length=1120317
Score = 114 bits (126), Expect = 1e-20
Identities = 169/237 (71%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032
|||||| | || ||||| || | ||| ||||| || | || |||||||| || |||
Sbjct 962623 ATTTATTGGCCACCTCTCAATCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTG 962564
Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092
|| |||| ||||| | |||| || | |||||||||||||| || | || ||||||
Sbjct 962563 TAGTCAGAGAGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 962504
Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCT 42151
|| | ||| | | |||||||| |||||| |||| ||| | | | ||||||
Sbjct 962503 TCTGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGA-CGTTGTCGATGGTGTCGGA 962445
Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || | |||||||| || || || | ||||| ||||||||||||||
Sbjct 962444 GGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| || | ||| || ||||| || ||||| ||||
Sbjct 961931 ACCACCTCTCAATCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 961872
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | |||||||||||||| || | || |||||||| | |||
Sbjct 961871 AAGAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGG 961812
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 42159
| | |||||||| |||||| |||| ||| | | | |||||| ||||| |
Sbjct 961811 AATACCTTCCTTGTCTTGGATTTTAGACTTGA-CGTTGTCGATGGTGTCGGAAGATTCAA 961753
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || | ||||| ||||||||||||||
Sbjct 961752 CTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| || | || |||||||| || ||||| ||||
Sbjct 962159 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 962100
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | || ||||| || || || | || |||||||| | |||
Sbjct 962099 AAGAGTTCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGG 962040
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCGCTCGATTCCA 42159
| | |||||||| ||| || ||||| ||| | || | ||||| ||||| |
Sbjct 962039 GATACCTTCCTTGTCTTGGATCTTGGATTTGA-CGTTGTCAATGGTGTCGGAAGATTCAA 961981
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || | ||||| || |||||||||||
Sbjct 961980 CTTCTAAAGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| || | ||| |||||||| || ||||| || |
Sbjct 962387 ACCACCTCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 962328
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | |||||||| || || || | || |||||||| | |||
Sbjct 962327 CAAGGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGG 962268
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTCGCTCGATTCC 42158
| | |||||||| ||| |||| | |||| ||| | | | |||||| |||||
Sbjct 962267 AATACCTTCCTTGTCT-TGAATTTTAGACTTGA-CGTTGTCGATGGTGTCGGAAGATTCG 962210
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | || ||||| || || || | ||||| || |||||||||||
Sbjct 962209 ACTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212745678720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |