Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 185 9e-42 >seq4 Length=1381050 Score = 185 bits (204), Expect = 9e-42 Identities = 843/1324 (64%), Gaps = 26/1324 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || |||||||| || || || | || || ||||| || |||||||| | Sbjct 121977 CCCCTACTCTTTTCAACGCCGGTACTCCTGCTCCTCAAATGTCGTCTTGTTTCCTTGTCG 121918 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | || | ||||| ||| ||| || | ||||| | || ||||| |||| Sbjct 121917 CCATGAAAGAAGACTCGATCGACGGTATCTACGACACTTTGAAAACTTGTGCTTTGATCT 121858 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || | || || || || || | ||||| || | ||| | ||| | |||| Sbjct 121857 CCAAGTCTGCCGGTGGTATTGGTTTGCACATCCACAACATCCGTAGTACTGGTGCTTACA 121798 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | |||||||| || ||||||||||| || |||||||| |||| || ||||||||| Sbjct 121797 TTGCTGGTACCAACGGTACCTCCAACGGTATCATCCCTATGGTCCGTGTGTTCAACAACA 121738 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || ||||| ||||| |||||| | ||| ||| ||||||| | || | | Sbjct 121737 CTGCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCTTTCGCCTTGTACTTGG 121678 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 | || |||||| ||||| | | |||||||||| | ||||||| ||||| || || Sbjct 121677 AACCTTGGCACTCGGACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAG 121618 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315 || || ||||| || ||| || || ||| | || || ||||| ||||| || | Sbjct 121617 AAATCAGAGCAAGAGATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTG 121558 Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACG 94375 | || ||||| | |||| ||||| | ||| || || ||| || || | || | Sbjct 121557 TTGAACAAAACGGTGAGTGGACCCTTTTCTCTCCTAACGAGGCTCCTGGCTTGGCTGATG 121498 Query 94376 TTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 ||| || | || || ||| | ||||| | | |||||| | || | ||| Sbjct 121497 TTTACGG-TGACGAATTCGAACAATTGTACGAAAGATACGAAAGAGAAAACAGAGGCAGA 121439 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 | | | | || || ||||| | ||| |||| | ||| || || ||| Sbjct 121438 CAAACTGTTAAGGCACAAAAATTGTGGTACTCCATCTTGGAAGCACAAACCGAAACCGGT 121379 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 || || | ||| |||| ||| || || ||| ||| ||||||| || || | || Sbjct 121378 ACTCCATTCATGTTGTACAAAGATGCTTGTAACAAGAAGACCAACCAAAAGAACTTGGGT 121319 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 | |||||| || || ||||| || ||||| || ||| ||||||| || || || Sbjct 121318 ATCATCAAGTCTTCCAACTTGTGCTGTGAAATTGTTGAATATTCTTCTCCAGAAGAAGTT 121259 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGCCTACACG 94671 ||||| |||||| ||| |||||| | || | | || || ||||||| | || Sbjct 121258 GCTGTTTGTAACTTGGCTTCCATCGCCTTGCCATCGTTTGTTGAAAAAGATGCCACCTCG 121199 Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACTTCGCGGGAAGGATG-GTCTTG- 94728 | ||| || | | | || || | |||| || |||| || || | Sbjct 121198 T------CTTGGTACAACTTTGAAAAGTTACATGAAGTT---ACTAAGGTTGTCACTCGT 121148 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 ||| ||||||| | || ||| |||| |||||| || || || || || || ||| Sbjct 121147 AACTTGAACAGAATCATTGACCGTAACTACTACCCAGTGCCAGAAGCCAAGCGTTCTAAC 121088 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 ||| || | || || | |||| || || ||| | || ||||| | || | Sbjct 121087 ATGAGAAATAGACCAATTGCTCTCGGTGTGCAAGGTCTTGCTGACGCCTTCATGGCTCTC 121028 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 ||| | || | |||||| || || || ||||| | | || ||||||| |||| Sbjct 121027 CGTTTACCATTTGACTCTCAAGAAGCCAAGGAATTGAACATTCAAATCTTCGAAACCATT 120968 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 || |||| || | || ||| || | |||||| | | || || | | ||||| Sbjct 120967 TACCACGGTGCTGTTGAATCTTCCATCGAGTTGGCCGAAGCTGAAGGTG---CTTACGAA 120911 Query 94969 TCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026 | ||| || || || ||| | |||| | || || |||||| | |||| | Sbjct 120910 ACTTTCGAAGGTTCTCCAGCTTCCA--AGGGTTTGTTGCAATTCGACTTGTGGGACAGAA 120853 Query 95027 AGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 |||| || | ||| |||||||| | || | | || | ||| |||||| | Sbjct 120852 AGCCATCTGAATTGTGGGACTGGGACACCTTGAAAC-AGAATATGGCCAAGCACGGTTTA 120794 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 | |||| || || | || || || ||||| || || |||||| | || || | || ||| Sbjct 120793 AGAAACTCGTTGTTGGTTGCTCCAATGCCAACTGCTTCCACGTCCCAAATTTTGGGTAAC 120734 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||| | |||||||| | ||| |||||| | ||| || | ||| | || || ||| Sbjct 120733 AACGAATGTTTCGAACCATACACTTCCAACATCTACTCTAGAAGAGTGTTGGCTGGTGAA 120674 Query 95206 TTCC 95209 |||| Sbjct 120673 TTCC 120670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723150527680