Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq6 125 6e-24 seq4 86.0 6e-12 >seq1 Length=2570408 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | || || || || ||||||||||| || || || | |||| || | Sbjct 1137226 CTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 1137285 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||||||||| || || || |||||||| Sbjct 1137286 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTG 1137345 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||||||| ||||||||||| | |||| Sbjct 1137346 TCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATG 1137405 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 1137406 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 1137441 >seq6 Length=1120317 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | |||| | Sbjct 961690 CTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCG 961631 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||||||||| || ||||| ||||| || Sbjct 961630 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTG 961571 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || ||| | || | || | |||||||||||| |||||||| | |||| Sbjct 961570 TCTTGGATCTTGGATTTAA-CGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 961512 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || ||||||||||| Sbjct 961511 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 961476 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || || || ||| | Sbjct 962602 CTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCCG 962543 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| || Sbjct 962542 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTG 962483 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| |||| || | || | ||||||||| || || ||||| | ||| | Sbjct 962482 TCTTGGATTTTAGACTTGA-CGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGAT 962424 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | ||| || ||||| |||||||| Sbjct 962423 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 962388 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||| |||||||| || || || | ||| | Sbjct 961918 CTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCG 961859 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| || Sbjct 961858 TCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTG 961799 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| |||| || | || | |||||||||||| || ||||| | ||| | Sbjct 961798 TCTTGGATTTTAGACTTGA-CGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961740 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | ||| || ||||| |||||||| Sbjct 961739 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 961704 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | |||| | Sbjct 962374 CTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCG 962315 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | || |||| ||||||||| || ||||| ||||| || Sbjct 962314 TCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATACCTTCCTTG 962255 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| |||| || | || | |||||||||||| |||||||| | |||| Sbjct 962254 TCTTGAATTTTAGACTTGA-CGTTGTCGATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 962196 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || || || || |||||||| Sbjct 962195 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || || | ||| || Sbjct 962146 CTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCG 962087 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||||||||| || || || ||||| || Sbjct 962086 TCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTTG 962027 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || ||||| || | || | |||||||||||| || ||||| | ||| | Sbjct 962026 TCTTGGATCTTGGATTTGA-CGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961968 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || || |||||||| Sbjct 961967 GGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932 >seq4 Length=1381050 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATAT--CGACGCACGGTTTGCGTAACTCGC 124197 |||||||||||| | || ||||| | |||| | | ||||||||| | |||||| Sbjct 120841 TTGTGGGACTGGGACACCTTGAAACA--GAATATGGCCAAGCACGGTTTAAGAAACTCGT 120784 Query 124198 TGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCT 124257 ||||||| || ||||| || || |||| | |||||||| || |||||||||| | Sbjct 120783 TGTTGGTTGCTCCAATGCCAACTGCTTCCACGTCCCAAATTTTGGGTAACAACGAATGTT 120724 Query 124258 TCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCA-AGTG 124316 |||| || | |||| ||| | ||| || ||||||| || || || || || | || Sbjct 120723 TCGAACCATACACTTCCAACATCTACTCTAGAAGAGTGTTGGCTGGTGAATTCCAGATTG 120664 Query 124317 ATAAATCATCATTTGGTGGACGACTTGGT 124345 ||| ||| | ||| || |||||||| Sbjct 120663 TTAATCCAT-ACTTGTTGCGTGACTTGGT 120636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003154799680