Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 127 3e-24 >seq4 Length=1381050 Score = 127 bits (140), Expect = 3e-24 Identities = 381/582 (65%), Gaps = 7/582 (1%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 |||| | ||| ||||||||| ||||| || ||||| ||| |||| ||||||||||| Sbjct 294430 AACAACAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAG 294371 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||| ||||| | || | | || | ||| || || | ||||| | ||| Sbjct 294370 AAAGTCAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 294311 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || || || || ||||| ||||| || || | || ||||| || | |||| | Sbjct 294310 GAGAAGAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCG 294251 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 |||| |||| || ||||| || |||||||| |||||| || ||| ||| Sbjct 294250 TCGTCACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCG 294191 Query 160154 ACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213 | |||||| ||||| ||| ||||| ||||||||| || |||||| | Sbjct 294190 ATGGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATAAC 294131 Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 ||||| |||| | ||| | ||||| || || || || ||||||| || | | | Sbjct 294130 GAGTAAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACAT-TTGGC 294072 Query 160274 TCCAGATA-CTGCACCTCCTGTGTGAACCTTT-GACCCAGATTGGCATTAACCAACCCGT 160331 | ||| | |||||| || | ||| ||| |||| || || | || || | || | Sbjct 294071 TTCAGTGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAG-TTTTCGTTGACGATACCAT 294013 Query 160332 CGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTC 160391 | | ||| |||||||| ||||| | ||| ||||| ||| |||| | | | | | Sbjct 294012 CAGAGGCAGCAAAGAAGGCCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGC 293953 Query 160392 TCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAG 160451 | || ||||| | ||||| ||| || | |||||| ||| |||| | || Sbjct 293952 TGTT---CCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAG 293896 Query 160452 CCTGAGCAGTTTTGTACATGGCCCAGATGGCGTGCTCTCTGA 160493 | | ||| | |||||||| |||||| |||| | ||||| Sbjct 293895 CTTCAGCTTTCTTGTACATTTGCCAGATCTCGTGGTATCTGA 293854 Score = 122 bits (134), Expect = 1e-22 Identities = 327/497 (66%), Gaps = 10/497 (2%) Strand=Plus/Plus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||||||| || |||||||||||||| |||||| | | |||| || |||||||| | Sbjct 120310 TCTTGTCGACGGTGAACTGAATGGCAGCGGCGGCAGCCTGGGTTCTGAGGTAGTACATAC 120369 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| | || |||| ||| ||||| | ||||| |||| || || | || | | | Sbjct 120370 CGGTCTTCAAACCTTTCTTCCAACCGTAGAAATGCATAGAAGTCAACTTACCCATGGTAG 120429 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 |||| ||||||||||||| || || ||| || ||||| | || | || || | Sbjct 120430 GGTCCTTGATGTGAATGTTCAATGATTGCGATTGATCAATGAAGGCTGCTCTGTCGGCAG 120489 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 |||||| ||| || || || || ||||||||||||||| ||| | || | | Sbjct 120490 CCATATCGATGATATGTTTTTGACTGATTTCCCACACCGTCTTGTACAATGCCTTGATTT 120549 Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 | | || || | | | | ||| ||| || ||||||| || || | | || || Sbjct 120550 GGTCGGGAACGT-TAGGTAAGCCCTGGATAGAACCGTTGTTGGAAATGATGTTGTTCTTC 120608 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGC----TCCCGCACCAGGTGGGGGTTGAT 204192 | | || ||| | || | ||||| | || |||| || || || || | Sbjct 120609 ATAGCATCGTTCCAGAGACCGA----GATCAACCAAGTCACGCAACAAGTATGGATTAAC 120664 Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 ||||| || || || | || ||| | || | | | | |||| ||| |||||||||| Sbjct 120665 AATCTGGAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTGGAAGTGTATGGTTCGAA 120724 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 |||||||| || ||||| || | ||| || || ||||| ||||| | | || Sbjct 120725 ACATTCGTTGTTACCCAAAATTTGGGACGTGGAAGCAGTTGGCATTGGAGCAACCAACAA 120784 Query 204313 GGAGTTGCGCACACCGT 204329 ||||| | | ||||| Sbjct 120785 CGAGTTTCTTAAACCGT 120801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155120484480