Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 3e-24
>seq4
Length=1381050
Score = 127 bits (140), Expect = 3e-24
Identities = 381/582 (65%), Gaps = 7/582 (1%)
Strand=Plus/Minus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|||| | ||| ||||||||| ||||| || ||||| ||| |||| |||||||||||
Sbjct 294430 AACAACAAGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAG 294371
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| | | ||| ||||| | || | | || | ||| || || | ||||| | |||
Sbjct 294370 AAAGTCAAGCCAGGCATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 294311
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093
|| || || || || ||||| ||||| || || | || ||||| || | |||| |
Sbjct 294310 GAGAAGAAAATACCTTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCG 294251
Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153
|||| |||| || ||||| || |||||||| |||||| || ||| |||
Sbjct 294250 TCGTCACTAATCCATCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCG 294191
Query 160154 ACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213
| |||||| ||||| ||| ||||| ||||||||| || |||||| |
Sbjct 294190 ATGGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAATAAC 294131
Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273
||||| |||| | ||| | ||||| || || || || ||||||| || | | |
Sbjct 294130 GAGTAAGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACAT-TTGGC 294072
Query 160274 TCCAGATA-CTGCACCTCCTGTGTGAACCTTT-GACCCAGATTGGCATTAACCAACCCGT 160331
| ||| | |||||| || | ||| ||| |||| || || | || || | || |
Sbjct 294071 TTCAGTGACCTGCACTTCAGAGGAGAAGTTTTCGACCAAG-TTTTCGTTGACGATACCAT 294013
Query 160332 CGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTC 160391
| | ||| |||||||| ||||| | ||| ||||| ||| |||| | | | | |
Sbjct 294012 CAGAGGCAGCAAAGAAGGCCAAGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGC 293953
Query 160392 TCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAG 160451
| || ||||| | ||||| ||| || | |||||| ||| |||| | ||
Sbjct 293952 TGTT---CCAGTCTTGGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAG 293896
Query 160452 CCTGAGCAGTTTTGTACATGGCCCAGATGGCGTGCTCTCTGA 160493
| | ||| | |||||||| |||||| |||| | |||||
Sbjct 293895 CTTCAGCTTTCTTGTACATTTGCCAGATCTCGTGGTATCTGA 293854
Score = 122 bits (134), Expect = 1e-22
Identities = 327/497 (66%), Gaps = 10/497 (2%)
Strand=Plus/Plus
Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
||||||| || |||||||||||||| |||||| | | |||| || |||||||| |
Sbjct 120310 TCTTGTCGACGGTGAACTGAATGGCAGCGGCGGCAGCCTGGGTTCTGAGGTAGTACATAC 120369
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| | || |||| ||| ||||| | ||||| |||| || || | || | | |
Sbjct 120370 CGGTCTTCAAACCTTTCTTCCAACCGTAGAAATGCATAGAAGTCAACTTACCCATGGTAG 120429
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017
|||| ||||||||||||| || || ||| || ||||| | || | || || |
Sbjct 120430 GGTCCTTGATGTGAATGTTCAATGATTGCGATTGATCAATGAAGGCTGCTCTGTCGGCAG 120489
Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077
|||||| ||| || || || || ||||||||||||||| ||| | || | |
Sbjct 120490 CCATATCGATGATATGTTTTTGACTGATTTCCCACACCGTCTTGTACAATGCCTTGATTT 120549
Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
| | || || | | | | ||| ||| || ||||||| || || | | || ||
Sbjct 120550 GGTCGGGAACGT-TAGGTAAGCCCTGGATAGAACCGTTGTTGGAAATGATGTTGTTCTTC 120608
Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGC----TCCCGCACCAGGTGGGGGTTGAT 204192
| | || ||| | || | ||||| | || |||| || || || || |
Sbjct 120609 ATAGCATCGTTCCAGAGACCGA----GATCAACCAAGTCACGCAACAAGTATGGATTAAC 120664
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
||||| || || || | || ||| | || | | | | |||| ||| ||||||||||
Sbjct 120665 AATCTGGAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTGGAAGTGTATGGTTCGAA 120724
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||||| || ||||| || | ||| || || ||||| ||||| | | ||
Sbjct 120725 ACATTCGTTGTTACCCAAAATTTGGGACGTGGAAGCAGTTGGCATTGGAGCAACCAACAA 120784
Query 204313 GGAGTTGCGCACACCGT 204329
||||| | | |||||
Sbjct 120785 CGAGTTTCTTAAACCGT 120801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155120484480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |