Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 127 5e-24 seq1 127 5e-24 >seq6 Length=1120317 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | |||||| || || |||||||||| ||||||||||| | ||| || || Sbjct 962603 TCTCAAGACCAAGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTGCC 962544 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || |||||||| | | |||||||| || ||| ||||| Sbjct 962543 GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 962484 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| ||| |||| |||||| | | ||| || || || ||||| Sbjct 962483 GTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCTAAAGTGAT 962424 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || ||||| ||||| Sbjct 962423 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTG 962391 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| || || || || ||||||| ||||||||||| | ||| || || Sbjct 961919 TCTCAAGACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCC 961860 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || ||||| || | | |||||||| || ||| ||||| Sbjct 961859 GTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 961800 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| ||| |||| |||||| | | ||| || || || ||||| Sbjct 961799 GTCTTGGATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961740 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || ||||| ||||| Sbjct 961739 GGTCTTACCGGTCAAAGTCTTGACAAAGATTTG 961707 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| ||||| || |||||||||| ||||||||||| | ||| || || Sbjct 962147 TCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 962088 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| || || ||||| ||||| | | |||||||| || || ||||| Sbjct 962087 GTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCCTT 962028 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| || ||| || | |||||| | | ||| || || || ||||| Sbjct 962027 GTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAAAGTGAT 961968 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || || || ||||| Sbjct 961967 GGTCTTACCGGTCAAGGTCTTAACGAAGATTTG 961935 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||| ||||| ||||| |||||||| || || || ||| |||| |||||| Sbjct 961597 AAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAACA 961656 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || |||||||||||| | || |||||| Sbjct 961657 TCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGA 961691 >seq1 Length=2570408 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| || || ||||||||||||| ||||||||||| ||| || || || Sbjct 1137225 TCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 1137284 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| ||||| ||||| | | |||||||| || || |||||| Sbjct 1137285 ATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTT 1137344 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || |||| |||||| | | || || ||||| || || Sbjct 1137345 GTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 1137404 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || || |||||||| Sbjct 1137405 GGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 1137437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921479160536