Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4 185 9e-42 seq6 104 2e-17 seq1 86.0 6e-12 >seq4 Length=1381050 Score = 185 bits (204), Expect = 9e-42 Identities = 554/844 (66%), Gaps = 16/844 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || | || | || || || || || || || || ||||||| ||| Sbjct 294712 TTTTGGTAATCACTGACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAGGAGATGTTT 294653 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || || ||||||| ||||||| ||| | | || | ||| | || Sbjct 294652 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAACTTTTCGTTACCCA--AGG-CAACC 294596 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | || |||||||| |||||||| | |||||| |||| || || | |||| | Sbjct 294595 AACAATCTGTCGGCGACGAACTCAACGTATTGGCACATCAAGTCCTTGTTCATACCCAAC 294536 Query 132781 AGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | ||| |||| || ||||||| || || ||||||| || || ||||| | Sbjct 294535 AAGCTGCAT-GGCAAAGCATCGGTGAAGAATTCTTTTTCGATGGAAACAGCTTCGGTAAT 294477 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||| | ||| | | | | || | | ||| || ||||| |||||| || Sbjct 294476 GATCTTTTCAACAATGGTTGGGTTTGGTCTGTTTTGCAAGTGGGAGAACAACAAGCAGGC 294417 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 ||||||| ||||| || ||||| | | || | |||||| |||||||||||| || Sbjct 294416 AAAGTCGGTGTGCAAACCTTCGTCACGACAGATCAACTCGTTGGAGAAAGTCAAGCCAGG 294357 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| || | || || | ||| || || | || || || || ||||| | || Sbjct 294356 CATCTTACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCAGAGAAGAAAATACC 294297 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 |||||||| || || || |||| | || |||||| || || | | ||||| Sbjct 294296 TTCGACGGCGGCAAAGGCAACCAATCTTTCACCGAACAAAGCGTCGTCGTCACTAATCCA 294237 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA- 133138 | || ||||| |||||||| | |||| ||| || || | ||||||||||| |||| Sbjct 294236 TCTCAAAGCCCAGTCGGCCTTCTTCTTGATGCATGGGATGTTGTCGATGGCGTTGAACAA 294177 Query 133139 -AACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 || || ||| ||| || | | ||||||||| || | ||| || |||| Sbjct 294176 GAAGTCAGCTTC-CTTTGGATCCTTG-ATGTAGGTGTCAATCAATAACGAGTAAGTTTCG 294119 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257 ||||| | ||| ||||| |||||| || ||||| || || || || |||||| Sbjct 294118 GAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCAGTGACCTGC 294059 Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317 ||||| | ||| ||||||| |||||||||||||| || || ||| || || Sbjct 294058 ACTTCAGAGGAGAAGTTTTCGACCAAGTTTTCGTTGACGATACCATCAGAGGCAGCAAAG 293999 Query 133318 AAGGCCAGCACGTGCTTG--ATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGC 133375 ||||||| | | || | ||||| | ||||||||| |||||| | |||||| Sbjct 293998 AAGGCCA--AGATTCTAGAAATGAAGAATCTTTCGTTGTCGGTCAAGCTGTTCCAGTCTT 293941 Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | ||||| || || ||| | ||| ||| ||||||| || || || || ||||| |||| Sbjct 293940 GGGTGTCTTTACTCAAGTCGAGCTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCTTGT 293881 Query 133436 ACAT 133439 |||| Sbjct 293880 ACAT 293877 >seq6 Length=1120317 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| || || | || || || ||||| ||| | || ||||| | Sbjct 961473 AAAATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATTACCTTGGAAGTCGAATCT 961532 Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| ||||| || |||| ||||| || || ||||| | || Sbjct 961533 TCCGACACCATCGACAACG-TTAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCAGA 961591 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || | | || | || || || || |||| |||| | ||| | |||||| Sbjct 961592 CCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTA 961651 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||||| | || || || ||||| || | |||||||| || Sbjct 961652 CAACATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 961702 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || |||||||| | || || || || || Sbjct 962388 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCCTCC 962447 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||||||| ||||| || || ||||| | ||||| Sbjct 962448 GACACCATCGACAACG-TCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCA 962506 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | | || | ||| || || || |||| |||| | || ||| |||||||| Sbjct 962507 GCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTCTCTGACTACAA 962566 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||||||||| | || || || ||||| || | |||||||| |||| Sbjct 962567 CATCCAAAAGGAATCTACCCTCCACTTGGTCTTGAGATTGAGAGGTGGCC 962616 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || ||||| ||| | || ||||| | || Sbjct 962160 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 962219 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||||| | ||||| || || ||||| | ||||| Sbjct 962220 GACACCATCGACAACG-TCAAGTCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCA 962278 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | | || | || || || || |||| |||| | ||| | ||||||||| Sbjct 962279 GCAAAGATTAATCTTTGCCGGTAAGCAATTGGAAGACGGCAGAACCTTGTCCGACTACAA 962338 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| || | |||||||| || Sbjct 962339 CATCCAAAAGGAATCCACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 962386 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || |||||||| | || || || | || Sbjct 961704 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961763 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||||||| ||||| || || ||||| | ||||| Sbjct 961764 GACACCATCGACAACG-TCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCAGACCA 961822 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | | |||| ||| || || || |||| |||| | || || |||||||| Sbjct 961823 GCAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTACAA 961882 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||| | || || || ||||| || | |||||||| || Sbjct 961883 CATCCAAAAAGAATCCACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 961930 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || |||||||| | || || || | || Sbjct 961932 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 961991 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | ||| || |||| ||||| || || || || | ||||| Sbjct 961992 GACACCATTGACAACG-TCAAATCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCA 962050 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | | || | || || ||||| |||| |||| | || || |||||||| Sbjct 962051 GCAAAGATTGATCTTTGCCGGTAAACAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 962110 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| || | |||||||| || Sbjct 962111 CATCCAAAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 962158 >seq1 Length=2570408 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| || || | || || || ||||| ||| | || |||||| || Sbjct 1137443 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1137384 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | | || || |||| |||||||| || || || | ||| Sbjct 1137383 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAAGAAGGTATCCCACCAGAC 1137324 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || | | || | || || || || |||| || | | ||| | |||||| Sbjct 1137323 CAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTAC 1137264 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| | || || || |||||| || | |||||||| || Sbjct 1137263 AACATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGTGG 1137214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172749982720