Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 241 2e-58 seq1 86.0 8e-12 >seq4 Length=1381050 Score = 241 bits (266), Expect = 2e-58 Identities = 1138/1777 (64%), Gaps = 73/1777 (4%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| || ||| || || ||||| | ||||| | |||||||| || || || || || Sbjct 122089 GAAAGACCTCAGCACTTGATCATGAGAGTCGCTGTTGGTATCCACGGTGACGACATCGAA 122030 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 |||| | ||||| ||| || ||||| | | |||| |||| | || || Sbjct 122029 CGTGTTATTGAGACTTACAACCTCATGTCTCAAAGACACTTCACTCACGGGTCCCCTACT 121970 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 || |||||||| ||||| || || |||||||| |||||||||| | || | || Sbjct 121969 CTTTTCAACGCCGGTACTCCTGCTCCTCAAATGTCGTCTTGTTTCCTTGTCGCCATGAAA 121910 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || || || ||| | || || |||| |||| | | ||||| ||||| |||| Sbjct 121909 GAAGACTCGATCGACGGTATCTACGACACTTTGAAAACTTGTGCTTTGATCTCCAAGTCT 121850 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAG-AGCCAACAAGT-CTCGTATTAGAG 111903 || |||||||| || |||||||||| | || | || || || || ||| | Sbjct 121849 GCCGGTGGTATTGGTTTGCACATCCACAACATCCGTAGT--ACTGGTGCTTACATTGCTG 121792 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || ||| || | ||||| || || ||| | || || || ||| ||| || | Sbjct 121791 GTACCAACGGTACCTCCAACGGTATCATCCCTATGGTCCGTGTGTTCAACAACACTGCCC 121732 Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGC 112017 | || || |||||| ||| | |||| || || |||| | || | || | Sbjct 121731 GTTACGTTGACCAAGGTGG---TAACAAGAGACCTGGTGCTTTCGCCTTGTACTTGGAAC 121675 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||| |||| ||| | || ||| | || | | || || ||| | || || Sbjct 121674 CTTGGCACTCGGACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAGAAA 121615 Query 112078 CGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | | || | ||||| ||| | || || |||||||| ||||| ||||||||| | ||| Sbjct 121614 T-CAGAGCAAGAGATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTGTT 121556 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 || | | || | ||| | || || | ||| || |||| || || | | |||| Sbjct 121555 GAACAAAACGGTGAGTGGACCCTTTTCTCTCCTAACGAGGCTCCTGGCTTGGCTGATGTT 121496 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGC-GACTG 112254 ||||| || || ||| | ||| || ||||| ||||| | ||| ||| Sbjct 121495 TACGGTGACGAATTCGAACAATTGTACGAAAGATACGAAAGAGAAAACAGAGGCAGACAA 121436 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 || || || | ||||| | | || | | | |||||||| || |||| Sbjct 121435 --ACTGTTAAGGCACAAAAATTGTGGTACTCCATCTTGGAAGCACAAACCGAAACCGGTA 121378 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 | |||| ||| | |||||||| || |||||| | |||| || |||||||| |||||| Sbjct 121377 CTCCATTCATGTTGTACAAAGATGCTTGTAACAAGAAGACCAACCAAAAGAACTTGGGTA 121318 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 | |||||| ||||||| | || ||||| | |||| | | ||| || | Sbjct 121317 TCATCAAGTCTTCCAACTTGTGCTGTGAAATTGTTGAATATTCTTCTCCAGAAGAAGTTG 121258 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT 112494 |||| |||||| | || || ||||| | || || ||| || ||| | | | | Sbjct 121257 CTGTTTGTAACTTGGCTTCCATCGCCTTGCCATCGTTTGTTGAAAAAGATGCCACCTCGT 121198 Query 112495 -TTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACA 112548 ||| | | |||||| | || |||||||| || |||||| ||| | |||| Sbjct 121197 CTTGGTACAACTTTGAAAAGTTACATGAAGTTACTAAGGTTGTCACTCGTAACTTGAACA 121138 Query 112549 GAGTTATTGATAGAAATTTTTACCCCGTTG-AGACTGCT--CGTAAATCTAATATGAGAC 112605 || | ||||| | || | ||||| || ||| | ||| ||||| |||||| Sbjct 121137 GAATCATTGACCGTAACTACTACCCAGTGCCAGAAGCCAAGCGT---TCTAACATGAGAA 121081 Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCC 112662 | | ||||||| ||||||||| |||||||| || || | ||||| ||| || | Sbjct 121080 ATAGACCAATTGCTCTCGGTGTGCAAGGTCTTGCTGACGCCTTCATGGCTCTCCGTTTAC 121021 Query 112663 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722 ||||||| || | ||||| |||||| | || | || || || || || || | Sbjct 121020 ---CATTTGACTCTCAAGAAGCCAAGGAATTGAACATTCAAATCTTCGAAACCATTTACC 120964 Query 112723 ACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCT 112779 ||| ||| |||| | ||| |||||||| || | ||| ||| | || ||||| | Sbjct 120963 ACGGTGCTGTTGAATC---TTCCATCGAGTTGGCCGAAGCTGAAGGTGCTTACGAAACTT 120907 Query 112780 TTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACC 112838 | || |||||||||||||| |||||| || | ||||| || ||||||| || | | Sbjct 120906 TCGAAGGTTCTCCAGCTTC-CAAGGGTTTGTTGCAATTCGACTTGTGGGA--CAGAAAGC 120850 Query 112839 AAGCTTCA--CTACGACTGGGACGCTCTCAAGGAACGCATCAAGG---AGAAGGGTCTTC 112893 | || | | ||||||||| | | | ||| | | || || | ||| | Sbjct 120849 CATCTGAATTGTGGGACTGGGACAC---CTTGAAACAGAATATGGCCAAGCACGGTTTAA 120793 Query 112894 GTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 112953 | ||| | ||| | || ||||||||||| || ||||| | ||||| |||||||| | Sbjct 120792 GAAACTCGTTGTTGGTTGCTCCAATGCCAACTGCTTCCACGTCCCAAATTTTGGGTAACA 120733 Query 112954 ATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAG 113012 | ||||| || ||||| ||||| | |||||||| ||| |||||| | || || || Sbjct 120732 ACGAATGTTTCGAACCATACACTTCCAACATCTACTCT-AGAAGAGTGTTGGCTGGTGAA 120674 Query 113013 TTTGTGATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCA 113070 || |||||| || || | | | || |||| | || | ||||||||| | Sbjct 120673 TTCCAGATTGTTAATCCATACTTGT--TGCGTGACTTGGTTGATCTCGGTCTCTGGAACG 120616 Query 113071 AGGATATGAAGGATCTCATGGT----GAAAGCGGGTGGTTCCATTCAAAATATTGTGGAT 113126 | | ||||||| | ||| | | | | ||||| || || | | Sbjct 120615 ATGCTATGAAGAACAACATCATTTCCAACAAC----GGTTCTATCCAGGGCTTACCTAAC 120560 Query 113127 ATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTC 113186 |||| || |||| ||| |||||| || || |||||||||| || || || Sbjct 120559 GTTCCCGACCAAATCAAGGCATTGTACAAGACGGTGTGGGAAATCAGTCAAAAACATATC 120500 Query 113187 ATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTC 113246 || || ||||| || || | | ||||||||||||| ||| |||| |||| Sbjct 120499 ATCGATATGGCTGCCGACAGAGCAGCCTTCATTGATCAATCGCAATCATTGAA--CATTC 120442 Query 113247 ATGGAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGG 113304 | ||| || || ||| ||| | |||||||||| | ||| |||||||||| | Sbjct 120441 ACATCAAGGACCCTACCATGGGTAAGTTGACTTCTATGCATTTCTACGGTTGGAAGAAAG 120382 Query 113305 GTCTCAAAACGGGGATGTATTACCTCCGATCTAAGGC 113341 || | || || || ||||| |||||| || | |||| Sbjct 120381 GTTTGAAGACCGGTATGTACTACCTCAGAACCCAGGC 120345 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 163547 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCG 163606 ||||| | ||||| ||| |||| || | ||||| |||||||| ||| | |||||| Sbjct 1293603 TATGGTAGAGTTGCTCCAAGATCGGGGTTGGCTGTCAAACACGGGATCTCAACTGGTGCT 1293662 Query 163607 GGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGAC 163666 |||||||||||| |||| |||| || |||||||| || ||| | |||||||| | | | Sbjct 1293663 GGTGTTATTGATGCCGATTACAGAGGAGAAGTCAAGGTGGTTTTGTTCAATCACGCAAAG 1293722 Query 163667 AAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAA 163705 |||||||| ||| | |||| ||| || | || || ||| Sbjct 1293723 AAAGACTTCGAGATCAAGAAGGGTGATAGAATTGCTCAA 1293761 Score = 91.5 bits (100), Expect = 2e-13 Identities = 341/520 (66%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 102099 GCCATCCA-AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGA 102157 |||||| | |||| | ||||| || | ||||| || || |||||| ||| ||| || Sbjct 294186 GCCATCGACAACA-TCCCATGCATCAAGAAGAAGGCCGACTGGGCTTTGAGATGGATTAG 294244 Query 102158 T-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 102216 | || | | ||| || || | ||| || | | || ||||| || || ||||| | Sbjct 294245 TGACGACGACGCTTTG-TTCGGTGAAAGATTGGTTGCCTTTGCCGCCGTCGAAGGTATTT 294303 Query 102217 TCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGT 102275 |||||||||||||||| ||| |||| | ||| | |||||| ||||| ||||| || Sbjct 294304 TCTTCTCTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTAAGATGCCTGGC 294362 Query 102276 CTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GG 102333 | |||||||||||| | |||| ||||||||| || | ||| || ||||| | Sbjct 294363 TTGACTTTCTCCAACGAGTTGATCTGTCGTGACGAAGGTTTGCACACCGACTTTGCCTGC 294422 Query 102334 TGGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTA 102393 | | || || | |||| | | ||||| | | | || | || ||| Sbjct 294423 TTGTTGTTCTCCCA--CTTGCAAAACAGACCAAACCCAACCATTGTTGAAAAGATCATTA 294480 Query 102394 AGGAAGCCGTTGAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGC-GCTCTCATC 102452 ||||| ||| || || || | |||| | ||||| | |||||| ||| | | Sbjct 294481 CCGAAGCTGTTTCCATCGAAAAAGAATTCTTCACCGATGCTTTGCCATGCAGCT-TGTTG 294539 Query 102453 GGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAG 102512 |||||||| || ||||| | |||| |||||| || | || ||||||||| | Sbjct 294540 GGTATGAACAAGGACTTGATGTGCCAATACGTTGAGTTCGTCGCCGACAGATTGTTG--G 294597 Query 102513 CAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACA 102570 | |||| | || | | ||| || || ||||| ||||||||||| |||| Sbjct 294598 TTGCCTTGGGTAACGAAAAGTTCTACAACGTCACCAACCCATTCGACTTCATGGAAAACA 294657 Query 102571 TTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 102610 | | | | || ||||| ||||||||||||||||| || Sbjct 294658 TCTCCTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGT 294697 >seq1 Length=2570408 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 16052 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 16111 |||||| || | ||||||||| ||||||| ||| || || | || ||| || ||||| Sbjct 606580 TTGCTTACCGATGGCATCAATTTCATCAACGAACACAATAGAAGGGGCATTCTCACGAGC 606639 Query 16112 -GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 16170 | ||| || || || || ||||| || || |||||||||||||| |||||||| | Sbjct 606640 AGTCTTGAACAAG-TCACGAACACGAGATGCACCGACACCAACAAACATTTCCACAAACT 606698 Query 16171 TTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 16229 | | | ||| | || ||| || ||| || |||||| || | |||| || | Sbjct 606699 CAGACCCAG-ACACGGAATAGAAAGGAACACCAGCTTCACCAGCGGTCGCTCTTGCTATT 606757 Query 16230 AGAGTCTTACCCGTACCTGG 16249 | ||||||||| |||||||| Sbjct 606758 AAAGTCTTACCAGTACCTGG 606777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742337925760