Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 172 6e-38 >seq4 Length=1381050 Score = 172 bits (190), Expect = 6e-38 Identities = 1106/1761 (63%), Gaps = 59/1761 (3%) Strand=Plus/Plus Query 109411 AGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGT 109470 || || |||||||| || || | ||| |||||| |||| | |||||| |||| | Sbjct 120357 AGGTAGTACATACCGGTCTTCAAACCTTTCTTCCAACCGTAGAAATGCATAGAAGTCAAC 120416 Query 109471 TTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGA 109530 || | || || || || | ||||| || || || ||||| ||||| Sbjct 120417 TTACCCATGGTAGGGTCCTTGATGTGAATGTTCAATGATTGCGATTGATCAATGAAGGCT 120476 Query 109531 CCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTAC 109590 | | || || ||||| ||||||||| ||||| || |||||||| || ||||||||| Sbjct 120477 GCTCTGTCGGCAGCCATATCGATGATATGTTTTTGACTGATTTCCCACACCGTCTTGTAC 120536 Query 109591 AAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACC 109650 || |||||| | ||||||| || | | || ||||| ||| || Sbjct 120537 AATGCCTTGATTTGGTCGGGAACGTTAGGTAAGCCCTGGATAGA---ACCGTTGTTGGAA 120593 Query 109651 ATGAGATC---CTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAACAAG 109706 |||| | |||||| | | ||||||||||| | | || ||||||| Sbjct 120594 ATGATGTTGTTCTTCATAGCATCGTTCCAGAGACCGAGATCAACCAAGTCACGCAACAAG 120653 Query 109707 -ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCG 109765 ||| | | || | ||||||||||| | | || ||||||||| | | Sbjct 120654 TATGGAT--TAACAATCTGGAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTGGAAG 120711 Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825 |||| ||||||||||| || ||||| || | ||||| | |||||||| || ||||| | Sbjct 120712 TGTATGGTTCGAAACATTCGTTGTTACCCAAAATTTGGGACGTGGAAGCAGTTGGCATTG 120771 Query 109826 GAGCCATGAGAAGACTGTTTCGGAGACC---CTTCGTCTTTACCCGCTCACGCATTGCGT 109882 |||| | | | ||||| | ||| ||| | | | | | | || | || Sbjct 120772 GAGCAACCAACAACGAGTTTCTTAAACCGTGCTTGGCCATATTCTGTTT---CAAGGTGT 120828 Query 109883 CCCAATCATAACGACCACTAAATTTAGT---CTCACCATCCCACATATCTGGTTGAAGTA 109939 |||| || |||| |||| || || | ||||||| || ||| | | Sbjct 120829 CCCAGTC-------CCAC--AATTCAGATGGCTTTCTGTCCCACAAGTCGAATTGCAACA 120879 Query 109940 CACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACT 109999 ||||| | ||| |||||||| | |||| | ||||| | || ||| | |||||||||| Sbjct 120880 AACCCTTGGAAGCTGGAGAACCTTCGAAAGTTTCGTAAGCACCTTCAGCTTCGGCCAACT 120939 Query 110000 CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGC 110059 || |||| || | || | || || || || || || || ||| |||| Sbjct 120940 CGATGGAAGATTCAACAGCACCGTGGTAAATGGTTTCGAAGATTTGAATGTTCAATTCCT 120999 Query 110060 GAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAA 110119 | |||| | |||| || || | || | || || | || || ||||| || | Sbjct 121000 TGGCTTCTTGAGAGTCAAATGGTAAACGGAGAGCCATGAAGGCGTCAGCAAGACCTTGCA 121059 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGT 110176 |||||||| |||| || | || |||||||||| || || |||| || |||| Sbjct 121060 CACCGAGAGCAATTGGTCTATTTCTCATGTTAGAACGCTTGGC---TTCTGGCACTGGGT 121116 Query 110177 AAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGA 110236 | |||| ||||| |||| | || | || || ||| ||| || | |||||| | Sbjct 121117 AGTAGTTACGGTCAATGATTCTGTTCAAGTTACGAGTGACAACCTTAGTAACTTCATGTA 121176 Query 110237 GTTTGTCGTAATCGAAC------GTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAA 110290 || || | | | || | | | || || | ||| | || | || | Sbjct 121177 ACTTTTCAAAGTTGTACCAAGACGAGGTGGCATCTTTTTCAACAAACGATGGCAAGGCGA 121236 Query 110291 TAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTAC 110350 | || || | || || |||| | || ||| | ||||| | |||||| | Sbjct 121237 TGGAAGCCAAGTTACAAACAGCAACTTCTTCTGGAGAAGAATATTCAACAATTTCACAGC 121296 Query 110351 ACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCAT 110410 ||||||||||| ||| |||| |||||||||||| || || | || ||| || |||| Sbjct 121297 ACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCAT 121356 Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470 | || || | |||| |||| ||||| ||||| || |||| | | |||| | ||| | Sbjct 121357 CTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCTTCCAAGATGGAGTACCACA 121416 Query 110471 CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCT-CGTACTTGGTGTACAAG 110529 | || |||||| || || || ||| | |||| | |||||| Sbjct 121417 ATTTTTGTGCCTTAACAGTTT-GTCTGCCTCTGTTTTCTCTTTCGTATCTTTCGTACAAT 121475 Query 110530 TCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGG 110589 | || ||||| | ||||| ||||||| | || |||| || ||| |||| ||| Sbjct 121476 TGTTCGAATTCGTCACCGTAAACATCAGCCAAGCCAGGAGCCTCGTTAGGAGAGAAAAGG 121535 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 | ||| | || | ||||| | ||||||||| || ||||||||||| | || | | Sbjct 121536 GTCCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGGAATCCAAAGGGCTGGG 121595 Query 110650 AAAAGGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708 ||||| || | || || ||||| | ||| || || | | || | || || Sbjct 121596 AAAAGATCTCTTGCTCTGATT-TCTTCTTTACCGTGATTCTTTCTGATGTCGATGAAATC 121654 Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACG 110762 | ||| ||||||||||| ||||| | || | |||| | || ||| || Sbjct 121655 AAAGATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAAGCACCAGGTCTCTTGTTACC 121714 Query 110763 ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCC 110822 ||| |||| ||| || || || ||| ||||| || | || |||||| || || || Sbjct 121715 ACCT---TGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACCATAGGGATGATACC 121771 Query 110823 ATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | ||| ||| || ||||| ||| | | || | | ||| |||| |||||| | Sbjct 121772 GTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACC-AGTACTACGGATGTTGTGGATGT 121830 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941 ||| |||||||||||| || |||| || ||||| | | | || | || | Sbjct 121831 GCAAACCAATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTCAAAGTGTCGTAGA 121890 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 |||| || ||||| ||| | || |||| | || || ||||| ||||| |||||| || Sbjct 121891 TACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGACATTTGAGGAGCAG 121950 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGT 111061 | || || || ||||| || ||||| | | | ||| |||| | | ||| ||||| || Sbjct 121951 GAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTTTGAGACATGAGGT 122010 Query 111062 TGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 |||| || || | | | | | | || | |||||| ||||||| || |||| ||| Sbjct 122011 TGTAAGTCTCAATAAC--ACGTTCGATGTCGTCACCGTGGATACCAACAGCGACTCTCAT 122068 Query 111120 GAACATATATTGAGGCGTTTC 111140 || || | ||||| |||| Sbjct 122069 GATCAAGTGCTGAGGTCTTTC 122089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/173 (73%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 158479 TATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATC--AACGTTGGTG 158536 ||||| | || || || | ||||| |||||||| || ||| | ||| ||| ||||| Sbjct 1293603 TATGGTAGAGTTGCTCCAAGATCGGGGTTGGCTGTCAAACACGGGATCTCAAC--TGGTG 1293660 Query 158537 CGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAG 158596 | || || || ||| | ||||| | ||||||||||| || ||| | |||||||| | | Sbjct 1293661 CTGGTGTTATTGATGCCGATTACAGAGGAGAAGTCAAGGTGGTTTTGTTCAATCACGCAA 1293720 Query 158597 ACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAA 158649 | || ||||| ||| | |||||||||||| | || || || | || ||||| Sbjct 1293721 AGAAAGACTTCGAGATCAAGAAGGGTGATAGAATTGCTCAATTAGTGTTAGAA 1293773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975941102400