Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 235 6e-57 seq1 95.1 1e-14 >seq4 Length=1381050 Score = 235 bits (260), Expect = 6e-57 Identities = 911/1412 (65%), Gaps = 31/1412 (2%) Strand=Plus/Plus Query 105925 TCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTT 105983 |||||| ||| |||||||| | ||||| ||||| || ||||| || |||||||| |||| Sbjct 120689 TCTTCT-AGAGTAGATGTTGGAAGTGTATGGTTCGAAACATTCGTTGTTACCCAAAATTT 120747 Query 105984 GTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC---CTTTT 106040 | | ||||| || ||||||||||| || | ||| | ||| | | ||| ||| Sbjct 120748 GGGACGTGGAAGCAGTTGGCATTGGAGCAACCAACAACGAGTTTCTTAAACCGTGCTTGG 120807 Query 106041 CCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAG--TTGAGCTTGGTTTCACCTTCCCA 106098 || | | ||| | | |||||||| | || || | | |||| ||||| Sbjct 120808 CCATATTCTGTTTCAAGGTG---TCCCAGTCCCACAATTCAGATGGCTTTCTG--TCCCA 120862 Query 106099 CATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACC 106158 || || ||||| | || || | ||| | |||||||| || || || || || | ||| Sbjct 120863 CAAGTCGAATTGCAACAAACCCTTGGAAGCTGGAGAACCTTCGAAAGTTTCGTAAGCACC 120922 Query 106159 TTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGAT 106218 || ||||| ||||| || | | || | | |||| || |||||||| ||||| Sbjct 120923 TTCAGCTTCGGCCAACTCGATGGAAGATTCAACAGCACCGTGGTAAATGGTTTCGAAGAT 120982 Query 106219 ACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATAC 106278 || |||| ||||||||||| | || ||||||| | ||| || || | Sbjct 120983 TTGAATGTTCAATTCCTTGGCTTCTTGAGAGTCAAATGGTAAACGGAGAGCCATGAAGGC 121042 Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCG 106337 || || |||||||| ||||| | | |||| ||||| | || ||| ||||| | | | | Sbjct 121043 GTCAGCAAGACCTTGCACACCGAGAGCAATTGGTCTATTTCTCATGTTAGAACGCTTG-G 121101 Query 106338 CAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396 | ||| || || || | || | |||||||| || ||| | || || |||| | Sbjct 121102 CT-TCTGGCACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTACGAGTGACAACC 121160 Query 106397 TTTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACA 106450 || || | |||||| | |||||| | | ||| | | | | |||| | ||| Sbjct 121161 TTAGTAACTTCATGTAACTTTTCAAAGTTGTACCAAGACGAGGTGGCATCTTTTTCAACA 121220 Query 106451 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 106510 || ||| | |||||| || ||||| || |||||||| || || | | || Sbjct 121221 AACGATGGCAAGGCGATGGAAGCCAAGTTACAAACAGCAACTTCTTCTGGAGAAGAATAT 121280 Query 106511 TCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 106570 || | |||||| |||||||||||| ||| || | ||||| ||||||||||| || Sbjct 121281 TCAACAATTTCACAGCACAAGTTGGAAGACTTGATGATACCCAAGTTCTTTTGGTTGGTC 121340 Query 106571 TTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG 106630 || ||||| || ||||| ||||| | |||| | || || || || || || |||| | Sbjct 121341 TTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTTTCGGTTTGTGCTTCC 121400 Query 106631 AGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTC 106689 | || | | ||||| | || ||| | || ||| | | | | || Sbjct 121401 AAGATGGAGTACCACAATTTTTGTGCCTTAACAGT-TTGTCTGCCTCTGTTTTCTCTTTC 121459 Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 ||| || ||| | ||| || || ||||| | || | | || || |||| Sbjct 121460 GTATCTTTCGTACAATTGTTCGAATTCGTCACCGTAAACATCAGCCAAGCCAGGAGCCTC 121519 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 || ||| ||||||| | ||| | ||| | ||||| |||||||||||||| || || Sbjct 121520 GTTAGGAGAGAAAAGGGTCCACTCACCGTTTTGTTCAACACGCTTCATGAAAAGATCAGG 121579 Query 106810 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 106868 |||||| |||| || || ||||||| | | | || ||||| | ||| || || || Sbjct 121580 AATCCAAAGGGCTGGGAAAAGATCTCTTGCTCTGA-TTTCTTCTTTACCGTGATTCTTTC 121638 Query 106869 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 106928 | || | ||| || | ||| |||| |||||| || || | || | |||| || | Sbjct 121639 TGATGTCGATGAAATCAAAGATGTCCGAGTGCCAAGGTTCCAAGTACAAGGCGAAAGCAC 121698 Query 106929 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 | || | | ||| |||| | || || || || ||| ||| || || || | | Sbjct 121699 CAGGTCTCTTG-TTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAACACACGGACC 121757 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || || || ||||| | || ||| || || || ||| || | | | Sbjct 121758 ATAGGGATGATACCGTTGGAGGTACCGTTGGTACCAGCAATGTAAGCACCAGTACTACGG 121817 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | | |||||||||| |||||||| || || |||| ||||| ||||| | Sbjct 121818 ATGTTGTGGATGTGCAAACCAATACCACCGGCAGACTTGGAGATCAAAGCACAAGTTTTC 121877 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 | ||| | |||||||||| ||| ||||| || || |||||| |||||| ||| ||| Sbjct 121878 AAAGTGTCGTAGATACCGTCGATCGAGTCTTCTTTCATGGCGACAAGGAAACAAGACGAC 121937 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 || || || || ||||| || ||||| || || || | ||||| |||| | | Sbjct 121938 ATTTGAGGAGCAGGAGTACCGGCGTTGAAAAGAGTAGGGGACCCGTGAGTGAAGTGTCTT 121997 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 || ||||| || ||| ||||| | ||| || ||||| || |||||||| || | Sbjct 121998 TGAGACATGAGGTTGTAAGTCTCAATAACACGTTCGATGTCGTCACCGTGGATACCAACA 122057 Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTC 107316 || || | ||| | || || || ||| |||| Sbjct 122058 GCGACTCTCATGATCAAGTGCTGAGGTCTTTC 122089 Score = 114 bits (126), Expect = 2e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 155102 |||||| | ||||| ||| |||| || | ||||| || || || || |||| | ||||| Sbjct 1293603 TATGGTAGAGTTGCTCCAAGATCGGGGTTGGCTGTCAAACACGGGATCTCAACT-GGTGC 1293661 Query 155103 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 155162 |||||||||||| |||| || | ||| |||||||| || ||| | |||||||||| | | Sbjct 1293662 TGGTGTTATTGATGCCGATTACAGAGGAGAAGTCAAGGTGGTTTTGTTCAATCACGCAAA 1293721 Query 155163 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202 |||||||| ||| | ||||| || ||| | || || ||| Sbjct 1293722 GAAAGACTTCGAGATCAAGAAGGGTGATAGAATTGCTCAA 1293761 >seq1 Length=2570408 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 |||||||| || |||||||| ||||| || | | ||| || | ||| || ||||| Sbjct 2441142 GATGCCAAGTTACAAACAGCGGTCTCGTCAGGAGAAGAGTATTCAACAATCTCAGTACAT 2441201 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 | || ||| || || || ||||| ||||| ||||| ||| ||||||| ||| Sbjct 2441202 AGATTCGAAGATTTGATTGTACCCAAGTTCTTCTGGTTCGACTTCCGATTGCACGAATCT 2441261 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACT 106628 ||||||||||| |||||| || ||||||||||| |||| Sbjct 2441262 TTGTAGAGCATATAGGGCAATCCGGTCTCCGTCTGAGACT 2441301 Score = 82.4 bits (90), Expect = 9e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 9359 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 9418 |||||| || | ||||||||| ||||||| ||| |||||| | || ||| || || || Sbjct 606580 TTGCTTACCGATGGCATCAATTTCATCAACGAACACAATAGAAGGGGCATTCTCACGAGC 606639 Query 9419 GATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 9478 | | || | || ||||| | || || |||||||||||||| |||||||| | Sbjct 606640 AGTCTTGAACAAGTCACGAACACGAGATGCACCGACACCAACAAACATTTCCACAAACTC 606699 Query 9479 TGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | | ||| | || ||| || ||| || |||||| || | |||| || | | Sbjct 606700 AGACCCAG-ACACGGAATAGAAAGGAACACCAGCTTCACCAGCGGTCGCTCTTGCTATTA 606758 Query 9538 GAGTCTTACCCGTACCTGG 9556 ||||||||| |||||||| Sbjct 606759 AAGTCTTACCAGTACCTGG 606777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980741001920