Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6 183 7e-41 seq1 165 2e-35 seq4 113 1e-19 >seq6 Length=1120317 Score = 183 bits (202), Expect = 7e-41 Identities = 176/223 (79%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||| |||||||| || ||||| || ||||| |||| |||| | Sbjct 962381 TCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAG-G 962323 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||| |||||||| ||||| | Sbjct 962322 TTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATAC 962263 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| |||||||||||||| ||||||||| || |||||||| ||| ||| ||||| | Sbjct 962262 CTTCCTTGTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCA 962203 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || ||||| || || ||||| | |||||| Sbjct 962202 AGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||||| Sbjct 962153 TCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGT 962094 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| || ||||| | || ||| |||||||| || || || Sbjct 962093 TCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACC 962034 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||||| ||||||||||| ||| ||| ||||| | Sbjct 962033 TTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAA 961974 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || ||||| || || ||||| | |||||| Sbjct 961973 AGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932 >seq1 Length=2570408 Score = 165 bits (182), Expect = 2e-35 Identities = 172/223 (77%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | |||||| |||||||| ||||| || ||||| || | |||| | Sbjct 1137219 TCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAG-G 1137277 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || ||||| | || ||| |||||||| || || | Sbjct 1137278 TTCTACCATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATAC 1137337 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 ||||||||||||| || || |||||| || || |||||||| || || ||||| | Sbjct 1137338 CTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCA 1137397 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || ||||| || ||||| | |||||| Sbjct 1137398 AGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 1137440 >seq4 Length=1381050 Score = 113 bits (124), Expect = 1e-19 Identities = 247/363 (68%), Gaps = 14/363 (4%) Strand=Plus/Minus Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAA-AAGCCCGGAGGTGATGACCTG 160570 |||||| ||||||||||| || |||| | |||| || | ||| || || Sbjct 121672 TGGCACTCGGACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAGAA--- 121616 Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630 || ||||| ||||| ||||| ||| | |||| | | ||||||||||||||| | || Sbjct 121615 ATCAGAGCAAGAGATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTGTT 121556 Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTT 160690 || | || || || |||| |||||||| ||| || || || ||||| | | ||||||| Sbjct 121555 GAACAAAACGGTGAGTGGACCCTTTTCTCTCCTAACGAGGCTCCTGGCTTGGCTGATGTT 121496 Query 160691 TATGGTTCCGAGTTCGAGACTCTT-TATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749 || ||| ||| ||||| || || || ||||||||||||| ||| |||| || | | Sbjct 121495 TACGGTGACGAATTCGA-ACAATTGTACGAAAGATACGAAAGAGAAAACAGAGGCAGACA 121437 Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809 || ||||| ||| || ||||| | |||| | | || ||| ||| |||| Sbjct 121436 AACTGTTAAGGCACAAAAATTGTGGTACTCCATCTTGGAAGCACAAACCGAAACCGGTAC 121377 Query 160810 GCCCTTTATCGCATACAAGGATGCCATCTGTCGC---AAGAGTAACCAGAAGAACTTTGG 160866 || || || ||||| ||||| ||| | |||| ||||| |||||||| || Sbjct 121376 TCCATTCATGTTGTACAAAGATGC---TTGTAACAAGAAGACCAACCAAAAGAACTTGGG 121320 Query 160867 AAT 160869 || Sbjct 121319 TAT 121317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481486278136