Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03-
01] 8 sequences; 12,176,763 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq6 183 7e-41
seq1 165 2e-35
seq4 113 1e-19
>seq6
Length=1120317
Score = 183 bits (202), Expect = 7e-41
Identities = 176/223 (79%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||| |||||||| || ||||| || ||||| |||| |||| |
Sbjct 962381 TCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAG-G 962323
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||| |||||||| ||||| |
Sbjct 962322 TTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATTAATCTTTGCTGGTCTGGTGGAATAC 962263
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| |||||||||||||| ||||||||| || |||||||| ||| ||| ||||| |
Sbjct 962262 CTTCCTTGTCTTGAATTTTAGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACTTCCA 962203
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || ||||| || || ||||| | ||||||
Sbjct 962202 AGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 962160
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||||||||| || || ||||| || ||||| || | ||||||
Sbjct 962153 TCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGT 962094
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | || ||||| || ||||| | || ||| |||||||| || || ||
Sbjct 962093 TCTACCGTCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACC 962034
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||||| ||||||||||| ||| ||| ||||| |
Sbjct 962033 TTCCTTGTCTTGGATCTTGGATTTGACGTTGTCAATGGTGTCGGAAGATTCAACTTCTAA 961974
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || ||||| || || ||||| | ||||||
Sbjct 961973 AGTGATGGTCTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 961932
>seq1
Length=2570408
Score = 165 bits (182), Expect = 2e-35
Identities = 172/223 (77%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | |||||| |||||||| ||||| || ||||| || | |||| |
Sbjct 1137219 TCTCAATCTCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAG-G 1137277
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||| || ||||| | || ||| |||||||| || || |
Sbjct 1137278 TTCTACCATCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATAC 1137337
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
||||||||||||| || || |||||| || || |||||||| || || ||||| |
Sbjct 1137338 CTTCTTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCA 1137397
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || ||||| || ||||| | ||||||
Sbjct 1137398 AGGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 1137440
>seq4
Length=1381050
Score = 113 bits (124), Expect = 1e-19
Identities = 247/363 (68%), Gaps = 14/363 (4%)
Strand=Plus/Minus
Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAA-AAGCCCGGAGGTGATGACCTG 160570
|||||| ||||||||||| || |||| | |||| || | ||| || ||
Sbjct 121672 TGGCACTCGGACATCTTTGATTTCATCGACATCAGAAAGAATCACGGTAAAGAAGAA--- 121616
Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630
|| ||||| ||||| ||||| ||| | |||| | | ||||||||||||||| | ||
Sbjct 121615 ATCAGAGCAAGAGATCTTTTCCCAGCCCTTTGGATTCCTGATCTTTTCATGAAGCGTGTT 121556
Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTT 160690
|| | || || || |||| |||||||| ||| || || || ||||| | | |||||||
Sbjct 121555 GAACAAAACGGTGAGTGGACCCTTTTCTCTCCTAACGAGGCTCCTGGCTTGGCTGATGTT 121496
Query 160691 TATGGTTCCGAGTTCGAGACTCTT-TATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749
|| ||| ||| ||||| || || || ||||||||||||| ||| |||| || | |
Sbjct 121495 TACGGTGACGAATTCGA-ACAATTGTACGAAAGATACGAAAGAGAAAACAGAGGCAGACA 121437
Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809
|| ||||| ||| || ||||| | |||| | | || ||| ||| ||||
Sbjct 121436 AACTGTTAAGGCACAAAAATTGTGGTACTCCATCTTGGAAGCACAAACCGAAACCGGTAC 121377
Query 160810 GCCCTTTATCGCATACAAGGATGCCATCTGTCGC---AAGAGTAACCAGAAGAACTTTGG 160866
|| || || ||||| ||||| ||| | |||| ||||| |||||||| ||
Sbjct 121376 TCCATTCATGTTGTACAAAGATGC---TTGTAACAAGAAGACCAACCAAAAGAACTTGGG 121320
Query 160867 AAT 160869
||
Sbjct 121319 TAT 121317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481486278136
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