Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphopichia_20homilentoma_20[genbank_20GCA_5F001599095.1_202016-03- 01] 8 sequences; 12,176,763 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3 210 2e-48 seq6 165 7e-35 seq1 149 5e-30 >seq3 Length=1810771 Score = 210 bits (232), Expect = 2e-48 Identities = 414/604 (69%), Gaps = 19/604 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG--TTTGGCAAA-ATGG 550047 |||| | ||||| |||||||| || || || |||||||| |||| ||| || | Sbjct 1438620 AGCTGTCGGTATTGATTTAGGTACTACCTACTCTTGTGTTGCCCATTTTGCCAACGATCG 1438679 Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107 | |||||||| ||||| ||||| |||||||||||||| |||||||||| || ||| Sbjct 1438680 T---GTTGAAATCATTGCAAATGACCAAGGTAACAGAACCACTCCATCTTTCGTCGGTTT 1438736 Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 ||| || |||||| || |||||||||| || || ||||||| || || || | Sbjct 1438737 CACTGACACTGAAAGATTGATTGGTGATGCTGCTAAGAATCAAGCTGCTATGAACCCAGC 1438796 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || || | || |||||||| ||||| || || |||| ||| | ||| | ||||| Sbjct 1438797 TAACACCGTGTTCGATGCTAAGCGTTTGATCGGTAGAAAGTTTGAAGATGCTGAAGTTCA 1438856 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 | |||| ||||| | |||||| | ||||| | ||||| || || | ||| | Sbjct 1438857 GCAAGATGCCAAGCACTTCCCTTTCAAGGTTGTTGAAAAATCTGGTAAGCCAAACATTCA 1438916 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTATGG 550343 || | | |||| || ||| |||||| |||||| |||| || || ||| Sbjct 1438917 AGTTGAATACAAAGG----CGAAACCAAGGTTTTCACTCCAGAAGAAATCTCTTCCATGA 1438972 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | || || ||||| |||| || | ||| | ||| | |||||| ||||| | Sbjct 1438973 TCTTGGGTAAGATGAAGGAAACCGCTGAAGGTTTCTTGGGTGACAAAGTTAACGATGCTG 1439032 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | ||||| ||||| || || |||||||| ||| | ||||| || || |||||||| Sbjct 1439033 TTGTCACTGTCCCAGCTTACTTCAATGACTCTCAAAGACAAGCCACCAAGGATGCTGGTT 1439092 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | || ||| | | |||||||| ||||| ||||| ||||| |||| | Sbjct 1439093 TGATTGCTGGTTTGAACGTTATGAGAATTATCAACGAACCAACTGCCGCTGCTATTGCTT 1439152 Query 550524 ATGGACTTGATAA-ACATAATGATCAAGAACTTAATGTACTCATCTTTGATT---GTGGA 550579 | || | || || | || | || |||||| || || | |||||||| | |||| Sbjct 1439153 ACGGTTTGGACAAGAAATCA-GAAAAAGAACAAAACGTCTTGATCTTTGACTTGGGTGGT 1439211 Query 550580 GGTA 550583 |||| Sbjct 1439212 GGTA 1439215 Score = 201 bits (222), Expect = 9e-46 Identities = 461/688 (67%), Gaps = 16/688 (2%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| |||||||| || || || | || ||| | ||||||| | |||||| Sbjct 1439395 AGAACTGCTTGTGAAAGAGCTAAGAGAACTTTGTCTTCTTCTGCTCAAACTTCCATTGAA 1439454 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || | | || || | || | | || |||| | || || | ||| ||| Sbjct 1439455 ATCGACTCCCTTTACGAAGGTGTCGACTTCTACACCTCTATCACCAGAGCTAGATTCGAA 1439514 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| || | || ||| || | |||||||| ||| | || || ||||| Sbjct 1439515 GAATTGTGTCAAGACTTGTTCAGATCTACTTTGGAACCAGTTGAAAAGGTGTTGAGAGAC 1439574 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| |||| ||||| |||| |||||||||| || |||||||| ||||| |||||| Sbjct 1439575 GCTAAGGTTGACAAATCTCAAGTTGATGAAATTGTCCTCGTTGGTGGTTCTACCAGAATT 1439634 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTT 552209 || || | | || || | | | ||||| ||||| || |||| | | | Sbjct 1439635 CCAAAGGTCCAAAAATTGGTCTCTGACTTCTTCAACGGTAAGGAACCAAATAAGTCTATC 1439694 Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || |||||||| |||||||| || ||||| || | ||||| || || | ||||| | Sbjct 1439695 AACCCAGATGAAGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCCATCTTGTCTGGTGAC 1439754 Query 552270 ACTGATGAAAA-ACTACAAAATATTGTACTTGTAG-ATGTTACTCCTCTATCTCTTGGTT 552327 ||| | || ||| ||| | |||| |||| | ||||| |||| | ||| | ||| Sbjct 1439755 ACTTCTTCCAAGACT-CAAGAC-TTGTTGTTGTTGGATGTTGCTCCATTGTCTTTGGGTA 1439812 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | ||||| | ||| ||||| ||||| || | ||| ||||| | || ||||| | Sbjct 1439813 TTGAAACCGCTGGTGGTATCATGACCAAGTTGATCCCAAGAAACTCCACCATTCCAACCA 1439872 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 | || || || ||||| || | || || ||| ||| ||| |||||| ||| Sbjct 1439873 AGAAGTCCGAAACCTTCTCTACTTACGCTGACAACCAACCTGGTGTCTTGATTCAAGTTT 1439932 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA- 552506 | ||||| ||||||| || || || || ||||||| | | || || ||| Sbjct 1439933 TCGAAGGTGAAAGAACTAAGACCAAGGACAA----CAACTTGTTGGGT--AAGTTCGAAC 1439986 Query 552507 -----GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 |||||||| || || || | || || || ||||| |||||||||||||| || | Sbjct 1439987 TTTCCGGTATTCCACCAGCCCCAAGAGGTGTTCCACAAATCGAAGTTACTTTCGACATTG 1440046 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGC 552589 |||||||||| || ||||| || |||| Sbjct 1440047 ATGCCAATGGTATCTTGAACGTCTCTGC 1440074 >seq6 Length=1120317 Score = 165 bits (182), Expect = 7e-35 Identities = 458/694 (66%), Gaps = 24/694 (3%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||| || || ||||||||||| || || | || ||| | | ||||| | |||||| Sbjct 795811 AGAACCGCCTGTGAAAGAGCCAAGAGATCTTTGTCTTCTTCTGCCCAAACTTCGATTGAA 795752 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || | | || || || |||| | || | || | || || | ||| ||| Sbjct 795751 ATCGACTCCCTTTACGAAGGTATCGATTTCTACACTTCCATCACCAGAGCTAGATTCGAA 795692 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | || | || | || ||| || || || ||||| ||| | || || | ||| Sbjct 795691 GAATTATGCGCAGACTTATTCAGATCTACCATGGACCCAGTCGAAAAGGTGTTGAAGGAT 795632 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | |||||||| || ||| |||| | ||||| ||| | |||||||| || || |||||| Sbjct 795631 GCTAAGATTGACAAGTCCCAAGTTGACGAAATCGTGTTGGTTGGTGGCTCCACCAGAATT 795572 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || || | ||| ||| ||| | ||| || ||||| | ||| |||| Sbjct 795571 CCAAAGAT---CCAAAAGTTGGTCTCTGACTTCTTTAACGGTAAGGA--GCCATGCAAGT 795517 Query 552207 --GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | || || ||||| || ||||| || ||||| || ||||||| ||||| | ||| Sbjct 795516 CGATCAACCCTGATGAAGCCGTTGCTTACGGTGCTGCTGTTCAAGCTGCTATCTTGACTG 795457 Query 552265 GACAAAC-TGATGAAAAACTACAAAA--TATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 | | || | | || ||| ||| | | |||| ||| ||||| |||| ||||| Sbjct 795456 GTGACACTTCTTCCAAGACT-CAAGACTTGTTGTTATTG--GATGTCGCTCCATTATCTA 795400 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| | ||||| | || ||| ||||||| || | ||| ||||| ||||||||| Sbjct 795399 TGGGTATCGAAACCGCAGGTGGTGTTATGACCAAATTGATCCCAAGAAACTCTACTATTC 795340 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | || || ||| || || || || || |||| || ||| | | ||| |||| Sbjct 795339 CAACCAAGAAGTCTGAAGTTTTCTCCACCTACGCAGACAACCAACCAGGTGTGTTGATTC 795280 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTT 552497 || | |||||||| || ||| || || || || |||||| |||| ||| Sbjct 795279 AAGTGTTTGAAGGTGAGAGAGCCAAGACAAAGGACAA----CAACTTGTTGGGTAAGTTT 795224 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | || ||||| || ||||| || | || || || || || ||||| ||||| ||| Sbjct 795223 GAATTGTCGGGTATCCCACCTGCACCCAGAGGTGTTCCACAGATCGAAGTCACTTTTGAT 795164 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGCTT 552591 ||||||| || || || ||||| || | |||| Sbjct 795163 GTCGATGCTAACGGTATCTTGAACGTCTCCGCTT 795130 Score = 143 bits (158), Expect = 2e-28 Identities = 328/484 (68%), Gaps = 16/484 (3%) Strand=Plus/Minus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || ||||| ||||||||||||||||||||||| ||||| || |||||| | ||||| Sbjct 796531 GTCGAGATTATCGCCAATGATCAAGGTAACAGAACCACTCCTTCGTATGTTGCCTTCACT 796472 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCA 550169 || | |||| || | ||||| || || || ||||||| || || || ||| | Sbjct 796471 GACAGTGAAAGATTGATCGGTGACGCTGCTAAGAATCAAGCAGCAATG--AACCCTCAAA 796414 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| | |||||||| ||| | |||||||| |||| ||| || || || || Sbjct 796413 ACACTGTCTTTGATGCCAAAAGATTAATTGGTAGAAAATTTGCAGACTCAGAAGTGCAAA 796354 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 ||| |||| | | || | | | ||||| | || || ||| | ||| | | Sbjct 796353 ATGATGTGAAACTCTTCCCATACAAGATTGTCGACAAAGGCGGTAAGCCTAACATTCAGG 796294 Query 550290 -CTACTCATGAAGGATCTGTTAAACAATTTTCA--CCAGAACAAATTTCATCTATGGTTT 550346 | | | | || | | | || | | |||| || || |||| ||||||||||||| Sbjct 796293 TCGAAT--TTAAAGGTGAGACCAA-AGTCTTCACTCCCGAGGAAATCTCATCTATGGTTT 796237 Query 550347 TAATGAAAATGAAACAAACAGCC-AGTGCT--TTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | || |||||| |||| ||| | ||| || | ||| |||| ||||| | Sbjct 796236 TGACCAAGATGAAAGAAACCGCCGAAGGCTACTTGGGAGGT---ACTGTTAATGATGCTG 796180 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | ||||| ||||| || ||||| ||||| ||| | ||||| || ||||| ||||| Sbjct 796179 TCGTCACTGTTCCAGCCTACTTTAACGACTCCCAAAGACAAGCCACCAAAGACGCTGGTT 796120 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | || || | | || ||||| ||||| |||||||| || | |||| Sbjct 796119 TGATTGCTGGTTTGAACGTGTTGAGAATCATCAACGAACCAACTGCTGCAGCTATAGCAT 796060 Query 550524 ATGG 550527 |||| Sbjct 796059 ATGG 796056 >seq1 Length=2570408 Score = 149 bits (164), Expect = 5e-30 Identities = 366/547 (67%), Gaps = 25/547 (5%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||| |||||||| ||||| || ||||| | | || | || Sbjct 564175 GCTATCGGTATCGATTTAGGTACCACCTACTCATGTGTCGCTACTTACGACTCTGCC--- 564119 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA-C 550110 ||||||||||||||||| || ||||||||| | |||||| |||| ||| |||||| | Sbjct 564118 GTTGAAATTATTGCCAACGAACAAGGTAACCGTGTTACTCCTTCTTTCGTTGCTTTCAAC 564059 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 | | || ||| | |||||||||| || || ||||||| || || || | || Sbjct 564058 AGTGAAGAAAGATTGA-TTGGTGATGCCGCCAAGAATCAAGCTGCTTTGAACCCAAGAAA 564000 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||| ||||| ||||| ||||| | ||| ||||| | ||||| Sbjct 563999 CACCGTCTTTGACGCTAAGCGTTTGATTGGTCGTGCTTTCGATGATGAATCCGTTCAAAA 563940 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCT---GGAAAACCTTATATTGA 550287 ||| || || |||||||||| || |||| | ||| || || || | ||||| Sbjct 563939 AGACATCAAATCTTGGCCTTTCAAA---GTTATCGACTCTAACGGTAACCCACAAATTGA 563883 Query 550288 AG--CTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTAT 550341 || | | | || | || || ||| || || || || |||| || || || Sbjct 563882 AGTCCAATACTTGGACGA------AACCAAGACCTTCTCTCCTCAAGAAATCTCCTCCAT 563829 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAG-TTACGGATG 550400 |||||| | || ||||| ||| ||| ||| | ||| |||||| || | | Sbjct 563828 GGTTTTGACCAAGATGAAGGAAATTGCCGAAGCTAAAATCGGT-AAGAAGGTTGAAAAAG 563770 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | || | ||||| ||||| || || || ||| | |||||||||||||| || || |||| Sbjct 563769 CTGTCGTCACTGTCCCAGCTTACTTCAACGACGCCCAACGTCAAGCTACCAAGGACGCTG 563710 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | |||||||| | || ||| | ||||| ||||| ||||| || |||||||| ||| Sbjct 563709 GTGCCATTGCTGGTTTGAACGTTTTGCGTATCATCAACGAACCAACCGCTGCTGCCATTG 563650 Query 550521 CATATGG 550527 | || || Sbjct 563649 CTTACGG 563643 Score = 104 bits (114), Expect = 2e-16 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 ||||||| |||||||| || ||||||| | | | | ||||| |||||| Sbjct 483854 ATACCATCTTCACCATAGACGAATTGAATAATATCACCCAAAGAGTTTCTGGTAGTACCA 483913 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||| | || | || ||||| || |||||| || | |||||||||||||| Sbjct 483914 TCATAATGAACCATGATATCTTCCAAAGCTTTAACCAAACGACGCTGGATATAACCAGTT 483973 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 ||||||||||| | || |||| ||||| ||||||||| || |||||| | |||||||| Sbjct 483974 TCTGCAGTTTTCACGGCGGTATCAATAAGACCTTCTCTACCGGCCATAGCGTGGAAGAAG 484033 Query 390991 AATTC 390995 ||||| Sbjct 484034 AATTC 484038 Score = 86.0 bits (94), Expect = 5e-11 Identities = 149/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| ||||| || ||||| |||| | ||||| |||||| Sbjct 1137234 CAAG-TGAAGGGTGGACTCCTTTTGG--ATGTTGTAGTCAGACAAGGTTCTACCATCTTC 1137290 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || |||||||| || | ||||||||| || || || || |||||||| ||||| Sbjct 1137291 CAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCTTG 1137350 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTT 563443 || || || || || || || || | | || | | ||| | |||| || | Sbjct 1137351 GATCTTGGACTTGACATTGTCGATGGTGTCGGAG-GACTCGACTTCCAAGGTAATGGTCT 1137409 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || | ||| || |||||||||||||| Sbjct 1137410 TACCGGTTAAAGTCTTGACGAAAATTTGCAT 1137440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295576923920